PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj0g3v0280689.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | bZIP | ||||||||
Protein Properties | Length: 209aa MW: 23669.3 Da PI: 7.5034 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 61.7 | 1.4e-19 | 146 | 206 | 3 | 63 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++++er++q+NRe+A+rsR+RK++e++eL + +++L+++Nk+L ++l +l++e+++l +e+ Lj0g3v0280689.1 146 QIRKERKRQSNRESAKRSRLRKQQECDELYQNIDTLKGKNKSLTEQLRSLSEECEALINEN 206 689****************************************************998776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.3E-13 | 142 | 202 | No hit | No description |
SMART | SM00338 | 3.4E-14 | 143 | 208 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.0E-16 | 146 | 206 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.174 | 146 | 209 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.06E-10 | 147 | 203 | No hit | No description |
CDD | cd14702 | 8.60E-17 | 149 | 199 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 151 | 166 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence Send to blast |
MATEESNDIG TPCKSVVPQD ETQNRPLLPD WTRMQAYYNP GSTQIPLLNP HATGSYLYHH 60 MTPNQDAALV FSQKVHQNFG KRNLDSKNNC AGNRDGMSMK DFSSTMNQQF NMVLGNENST 120 VFNHNLGTGL NASSISAQLT KLEADQIRKE RKRQSNRESA KRSRLRKQQE CDELYQNIDT 180 LKGKNKSLTE QLRSLSEECE ALINENDSI |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj0g3v0280689.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006605461.1 | 2e-52 | G-box-binding factor 1 isoform X1 | ||||
Refseq | XP_006605462.1 | 2e-52 | G-box-binding factor 1 isoform X1 | ||||
Refseq | XP_025983085.1 | 2e-52 | G-box-binding factor 1 isoform X1 | ||||
Refseq | XP_028221189.1 | 2e-52 | G-box-binding factor 1-like isoform X1 | ||||
TrEMBL | A0A371GY55 | 6e-54 | A0A371GY55_MUCPR; G-box-binding factor 1 (Fragment) | ||||
STRING | GLYMA20G01030.1 | 7e-52 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF14940 | 10 | 13 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36730.2 | 3e-21 | G-box binding factor 1 |