PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj0g3v0201259.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family bZIP
Protein Properties Length: 460aa    MW: 51018.5 Da    PI: 6.7984
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj0g3v0201259.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.59.4e-11218252539
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 
                      k  rr+++NReAAr+sR+RKka++++Le    +L 
  Lj0g3v0201259.1 218 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLN 252
                      7789***********************97544444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.9E-9211260No hitNo description
SMARTSM003381.8E-8214287IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.243216260IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.82E-7218260No hitNo description
PfamPF001702.6E-8218256IPR004827Basic-leucine zipper domain
CDDcd147081.02E-20218262No hitNo description
PROSITE patternPS000360221236IPR004827Basic-leucine zipper domain
PfamPF141444.0E-29310383IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 460 aa     Download sequence    Send to blast
MGFSLAIDPE AEQQKPQQEQ EFTKFLGSSM IMASGVVKST NSTTTTTTRL EPPLPPPSHH  60
LHHQIQENQI SFGMVNPSSS SSSIPGNYLS KDSGSYDLGE LDQAFFLYLD GQADPSSVQD  120
QRQNSSSSGM RPPPTLNIFP SQPMHVAPPS NSKTSMQLPS PQTSGSKRST QPSMELANPR  180
NQAITSAPQP PKTVKRENNR KGTTSSSEQE GPKTPDPKTL RRLAQNREAA RKSRLRKKAY  240
VQQLESSRIK LNQLEQELQR ARGQGMLLNG GGLLGGEQGI SVSMNNISSE AAMFDMEYAR  300
WLEEHHRVVC EMRAALQEHL HENELRLYVE NYLAHYNQLL SLKSMVAKTD AFHLVFGMWM  360
TPAERCFMWI GGFRPSELIK IILSQIEPLT EQQILGICGL QQSTQEAEEA LSQGLEALNH  420
SLSDTITSDS LSCPPNMANY MGQMAVAMNK LSTLEGFLRQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Lja.55500.0floral bud| root
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Specifically expressed in roots. {ECO:0000269|PubMed:12777042}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj0g3v0201259.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027366007.10.0bZIP transcription factor TGA10-like
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLK7LI970.0K7LI97_SOYBN; Uncharacterized protein
STRINGGLYMA10G11985.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47313455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-143bZIP family protein