PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Lj0g3v0121789.1

Organism

Lotus japonicus

Taxonomic ID

34305

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus

Family

VOZ

Protein Properties

Length: 466aa MW: 52929.1 Da PI: 5.3577

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Lj0g3v0121789.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	422.9	5.2e-130	223	439	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaae 94 pppsafl+pkcalwdc+rpaq ew+qdycss+h+ +a +eglpgttp++rp+gid+kdg+lfa++ ak+qgkevgip+cegaa++kspwna+e Lj0g3v0121789.1 223 PPPSAFLAPKCALWDCFRPAQRLEWCQDYCSSHHELVANKEGLPGTTPIVRPRGIDIKDGPLFASVLAKTQGKEVGIPKCEGAASTKSPWNAPE 316 89****************************************************************************************** PP VOZ 95 lfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelk 188 +fdlslleget+rewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmke+gg+krsyymdpqp+s++ewhl+eyein+ d +alyrlelk Lj0g3v0121789.1 317 FFDLSLLEGETVREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEHGGQKRSYYMDPQPLSYLEWHLFEYEINNHDGCALYRLELK 410 ****************************************************************************************** PP VOZ 189 lvdekksakgkvskdsladlqkklgrlta 217 lvd+kks+kgkv+++sl+dlq+k+g+lta Lj0g3v0121789.1 411 LVDKKKSPKGKVTRESLTDLQNKMGKLTA 439 *************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence Send to blast
MKEKEKHLVD KIQGIFTNLQ YARKENRAND IVICEEQMHQ FLREWKAELE SPATSLANGS 60 FDSFTGELAQ LLQEIEEQDD ATSPLTKPVP LKTEPHPNNV SDSSYPFFEE KCFNDNQPLY 120 HTFEGSSSTL YNNAFNNSDI IQLDYHQLSL NHNLDHNTVG HNSDLIGQFD LSQELRHHTE 180 MKNSESTQII FDEGFDCSQF FGDDDPVQCG DNIIPNILPS IRPPPSAFLA PKCALWDCFR 240 PAQRLEWCQD YCSSHHELVA NKEGLPGTTP IVRPRGIDIK DGPLFASVLA KTQGKEVGIP 300 KCEGAASTKS PWNAPEFFDL SLLEGETVRE WLFFDKPRRA FESGNRKQRS LPDYSGRGWH 360 ESRKQVMKEH GGQKRSYYMD PQPLSYLEWH LFEYEINNHD GCALYRLELK LVDKKKSPKG 420 KVTRESLTDL QNKMGKLTAA VSSSDDALPD KGNTTPKSKN VGCPEN

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence Send to blast

MKEKEKHLVD KIQGIFTNLQ YARKENRAND IVICEEQMHQ FLREWKAELE SPATSLANGS  60
FDSFTGELAQ LLQEIEEQDD ATSPLTKPVP LKTEPHPNNV SDSSYPFFEE KCFNDNQPLY  120
HTFEGSSSTL YNNAFNNSDI IQLDYHQLSL NHNLDHNTVG HNSDLIGQFD LSQELRHHTE  180
MKNSESTQII FDEGFDCSQF FGDDDPVQCG DNIIPNILPS IRPPPSAFLA PKCALWDCFR  240
PAQRLEWCQD YCSSHHELVA NKEGLPGTTP IVRPRGIDIK DGPLFASVLA KTQGKEVGIP  300
KCEGAASTKS PWNAPEFFDL SLLEGETVRE WLFFDKPRRA FESGNRKQRS LPDYSGRGWH  360
ESRKQVMKEH GGQKRSYYMD PQPLSYLEWH LFEYEINNHD GCALYRLELK LVDKKKSPKG  420
KVTRESLTDL QNKMGKLTAA VSSSDDALPD KGNTTPKSKN VGCPEN

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Lja.20279	0.0	pod\| root

Expression -- Description ? help Back to Top
Source	Description
Uniprot	TISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Lj0g3v0121789.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027346709.1	0.0	transcription factor VOZ1-like
Refseq	XP_027346710.1	0.0	transcription factor VOZ1-like
Swissprot	Q9SGQ0	1e-150	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A1S3EA29	0.0	A0A1S3EA29_CICAR; transcription factor VOZ1
STRING	XP_004505529.1	0.0	(Cicer arietinum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-146	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]