PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.3004s0001.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | WRKY | ||||||||
Protein Properties | Length: 222aa MW: 23562.4 Da PI: 5.1024 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 35.1 | 2.7e-11 | 201 | 221 | 2 | 22 |
--SS-EEEEEEE--TT-SS-E CS WRKY 2 dDgynWrKYGqKevkgsefpr 22 +Dgy+WrKYGqK vk+s++pr Kalax.3004s0001.1.p 201 EDGYRWRKYGQKAVKNSPYPR 221 8*******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.7E-12 | 185 | 221 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.48E-9 | 192 | 221 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 14.079 | 195 | 221 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.9E-7 | 201 | 221 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence Send to blast |
MSDHQPTDFF NFHDPFVTYQ YSNLLGQAGA TTAPTSAASS SLYDNSSYNS GITGMSFSES 60 LDGSVDYNTL ARAFGLSSSS SEELFSSVVN EGLGYGKAQG DQMLQGVGNN GQIGAIGGSS 120 GGGEVVLASP GPNSSISSSS GEASGREEDC SKEQKVAKGS HEDEDGDSSK KQSKQSNKKG 180 EKRQREPRFA FMTKSEVDHL EDGYRWRKYG QKAVKNSPYP R* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009353824.1 | 9e-46 | PREDICTED: probable WRKY transcription factor 71 | ||||
Refseq | XP_009360850.1 | 9e-46 | PREDICTED: probable WRKY transcription factor 71 | ||||
STRING | XP_009353824.1 | 4e-45 | (Pyrus x bretschneideri) | ||||
STRING | XP_009360850.1 | 4e-45 | (Pyrus x bretschneideri) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18170.1 | 2e-20 | WRKY DNA-binding protein 28 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.3004s0001.1.p |