PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.1624s0003.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | EIL | ||||||||
Protein Properties | Length: 628aa MW: 71457.5 Da PI: 5.2495 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 519.4 | 1.6e-158 | 47 | 426 | 1 | 354 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasds 90 +el++rmw+d+mll++lke++++ ke ++++k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gasd+ Kalax.1624s0003.1.p 47 DELERRMWRDRMLLRKLKEQNRS----KEG-IDSAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDN 131 79******************998....787.9********************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HH CS EIN3 91 LraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelw 180 LraWWkekv+fdrngpaaiskyqa+n i+++++++++ s++hsl+elqDTtlgSLLsalmqhcdppqrrfplekg++pPWWPtG+e+w Kalax.1624s0003.1.p 132 LRAWWKEKVRFDRNGPAAISKYQADNCIPGRSEECDA-VGSTPHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGIAPPWWPTGNEDW 220 ***********************************88.9*************************************************** PP HHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX.XXXXXX CS EIN3 181 wgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah.ssslrk 269 w++lgl+kdqg+ppykkphdlkkawkvsvLtavikhm p+i++ir+l+rqsk+lqdkm+akes+++l+++nqee++ ++++++ + ++ Kalax.1624s0003.1.p 221 WPQLGLPKDQGPPPYKKPHDLKKAWKVSVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALSRKLYPDsCPPMSA 310 ***********************************************************************************5447888 PP XXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX...............................XXXXXXXXXXXXXXXXXXXXX..... CS EIN3 270 qspkvtlsceqkedvegkkeskikhvqavktta...............................gfpvvrkrkkkpsesakvsskevsrt 328 +s ++++ + +++dveg +++ ++ ++k ++ ++++ rkrk +++ +++++ + ++t Kalax.1624s0003.1.p 311 GSGSYVIGDISDYDVEGVDDEPSNEFVNQKPQDvnlynrrgggaldglmmqplvptvkteildgNLDFSRKRKLPSTVETQMMMDHKIYT 400 ****************5555554777777777789***************************************99999999888899** PP .XXXXXXX.XXXXXXXXXXXXXXXXX CS EIN3 329 cqssqfrgsetelifadknsisqney 354 c+ q+++ +++l+f d++s++++++ Kalax.1624s0003.1.p 401 CEYPQCPYGDYRLGFLDRTSRNNHHM 426 ***********************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 2.3E-131 | 47 | 294 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 8.4E-76 | 168 | 304 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 1.31E-61 | 173 | 297 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 628 aa Download sequence Send to blast |
MSIFEEMSFC GNLDFFSARP AEISVSPEVE PEATVEEDYT DDELDVDELE RRMWRDRMLL 60 RKLKEQNRSK EGIDSAKQRQ SQEQARRKKM SRAQDGILKY MLKMMEVCKA QGFVYGIIPE 120 KGKPVSGASD NLRAWWKEKV RFDRNGPAAI SKYQADNCIP GRSEECDAVG STPHSLQELQ 180 DTTLGSLLSA LMQHCDPPQR RFPLEKGIAP PWWPTGNEDW WPQLGLPKDQ GPPPYKKPHD 240 LKKAWKVSVL TAVIKHMFPD IAKIRKLVRQ SKCLQDKMTA KESATWLAII NQEEALSRKL 300 YPDSCPPMSA GSGSYVIGDI SDYDVEGVDD EPSNEFVNQK PQDVNLYNRR GGGALDGLMM 360 QPLVPTVKTE ILDGNLDFSR KRKLPSTVET QMMMDHKIYT CEYPQCPYGD YRLGFLDRTS 420 RNNHHMSCPY QNNSFSQGSA VQNFQIINDS AAPVAISFPQ PKPVTSFMNQ NASSQNPGLE 480 LPEDAHKRIS ELMSVYDANL HQNTSMDVAN FKRIDNQRHL PLEPQQLSQQ QQPQTKQTFQ 540 FQLDDNLHGQ RPMFGDSLPE EINMSFNNSV FSTNGVQFDQ TKLFDSQFGI NPNDGMPDFR 600 FESSFNFPCA DFSVDPPPKQ DMPIWYM* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 4e-85 | 171 | 304 | 1 | 134 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 4e-85 | 171 | 304 | 1 | 134 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002276380.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Refseq | XP_010659025.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Swissprot | O24606 | 0.0 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | A0A438JCI9 | 0.0 | A0A438JCI9_VITVI; Protein ethylene insensitive 3 | ||||
TrEMBL | F6HIW5 | 0.0 | F6HIW5_VITVI; Ethylene insensitive 3-like 1 protein | ||||
STRING | VIT_13s0047g00250.t01 | 0.0 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20770.1 | 0.0 | EIL family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.1624s0003.1.p |