PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.1542s0001.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 530aa    MW: 59041.8 Da    PI: 7.3451
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.1542s0001.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.63.5e-10232274241
                          XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
               bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                          ++ k  rr+++NReAAr+sR+RKka++++Le    + ++Le+e
  Kalax.1542s0001.1.p 232 RDAKTLRRLAQNREAARKSRLRKKAYVQQLESsriRLAQLEQE 274
                          678999************************9633356666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.4E-8228280No hitNo description
SMARTSM003380.0012231284IPR004827Basic-leucine zipper domain
PfamPF001702.4E-7232274IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.921233277IPR004827Basic-leucine zipper domain
CDDcd147082.92E-20235287No hitNo description
SuperFamilySSF579594.34E-7235273No hitNo description
PROSITE patternPS000360238253IPR004827Basic-leucine zipper domain
PfamPF141445.1E-31328403IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 530 aa     Download sequence    Send to blast
MASSAHNNDH PSRQQQEAKQ HGPHHQFSSS GMMMMMQPLH PSSSSSPSLH PKLICAKDDR  60
GGAAYGLGEL DEALFLYLNR QPQHEVAEVH QQQQKQQQQL ELEHHHHSID LQQQITHDGG  120
MRPTLNIFPS QPMHVEPPSA TNQLVVQVNN KSNETDPRGL VVVVSGAAQQ GEVVSVGSSS  180
KMVSAAEPIS TDILPNSTLI LSNTNQGKRT SSNSKRGPAS SSELLITQSQ TRDAKTLRRL  240
AQNREAARKS RLRKKAYVQQ LESSRIRLAQ LEQEIQRARS QGAHFGGGLI LGAEQHLGLS  300
GGINNFTTDA AIFDMEYARW LEEHHRLMCE LRAAIEEHLS ENELQIYVDN CLAHFDEIMN  360
IKSIMAKTDV FHLISGSWKS PAERCFMWIG GFRPSQIIKV VMSKIEGLTD EQAVGICGLQ  420
RSMEQAEAAL SHGLEELNHS LSDAIVYDSL TSPPRDMTNY MGQMAMAASK LSVLEGFVRQ  480
ADNLRYQAIH RLHQILMTRQ TARGLLLIAE YFHRLRALSS LWLARPPRE*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017619928.10.0PREDICTED: transcription factor TGA2-like isoform X1
SwissprotQ52MZ21e-178TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A0D2QAL31e-179A0A0D2QAL3_GOSRA; Uncharacterized protein
TrEMBLA0A0D2RB021e-180A0A0D2RB02_GOSRA; Uncharacterized protein
TrEMBLA0A314UYM71e-179A0A314UYM7_PRUYE; BZIP transcription factor TGA10 isoform X1
STRINGXP_009357109.11e-180(Pyrus x bretschneideri)
STRINGGorai.002G228200.11e-180(Gossypium raimondii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-146bZIP family protein