PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.1320s0004.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GeBP
Protein Properties Length: 456aa    MW: 50506.8 Da    PI: 4.7933
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.1320s0004.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573117.38.9e-37138237198
               DUF573   1 klfqrlwseeDeivlLqGlidfkaktgkspsd..didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqki 88 
                          klfqrlw++eDei lLqG++d+ +++g+s+ +  d+ +fy+++k++++++++k+qlveK+rrLKkK+++  ++++ gke++f+++hdq +
  Kalax.1320s0004.1.p 138 KLFQRLWTDEDEIGLLQGFLDYSTQRGTSQNNphDTAQFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVLARVSLGKEVQFKSPHDQAT 227
                          579*************************555446******************************************************** PP

               DUF573  89 felskkiWgs 98 
                          fe++ kiWg+
  Kalax.1320s0004.1.p 228 FEVATKIWGT 237
                          ********95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045049.5E-34140236IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 456 aa     Download sequence    Send to blast
MASEENQRAP IAAVKIGNSN DEEAEKIDEE DGETEETEEE EEEGDDGDGG IAGDHGCGVG  60
RPAADEEEDV EIGAKEDEED RNVSPNSDPA RLAVTVKVPP PSVVIVPAKR PRIVEHEAVG  120
EPIGERRVSQ VGDDQARKLF QRLWTDEDEI GLLQGFLDYS TQRGTSQNNP HDTAQFYDQI  180
KSKLQLDFNK NQLVEKLRRL KKKYRNVLAR VSLGKEVQFK SPHDQATFEV ATKIWGTPQN  240
SHSSKDQQRQ HQHQQMRGVD VDDDMPPNFN PASANLNLNV ASNFNNFNCS GGYSNHHHHS  300
ELVAADERKS QPEQQKAKKR IRVKMEDSRR LMDQKGSAVA ALASNLSPAQ SPIWQPVTGL  360
STPSLVEETV KNKISPLMYD RYGGSGVGGS GGLGDGIVSP VPLSFASPFN LFGTEVLDDR  420
WRKQQILELE VYSKRLELVQ EQIKLTLEQL RSTGS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.24e-48DNA-binding storekeeper protein-related transcriptional regulator