PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.1100s0003.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | WRKY | ||||||||
Protein Properties | Length: 736aa MW: 79843 Da PI: 5.9722 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.5 | 1e-31 | 313 | 370 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsY+rCt+ +Cpvkkkvers+ ++ v+ei+Y+g Hnh+k Kalax.1100s0003.1.p 313 EDGYNWRKYGQKQVKGSEYPRSYFRCTHMNCPVKKKVERSH-EGIVTEIIYKGAHNHPK 370 7****************************************.9**************85 PP | |||||||
2 | WRKY | 103.7 | 9.9e-33 | 525 | 583 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k v++tYeg+Hnh+ Kalax.1100s0003.1.p 525 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASHDLKSVITTYEGKHNHD 583 59********************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 24.271 | 307 | 371 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 1.1E-27 | 310 | 371 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.14E-25 | 311 | 371 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.7E-36 | 312 | 370 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.5E-25 | 313 | 369 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 6.5E-37 | 510 | 585 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.09E-28 | 517 | 585 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 38.618 | 520 | 585 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.0E-37 | 525 | 584 | IPR003657 | WRKY domain |
Pfam | PF03106 | 4.6E-25 | 526 | 583 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 736 aa Download sequence Send to blast |
MDEHAAAMMG DWVPPSPSPK AFFSSLLGGD EQISTGPMPQ IPDEARNGGC SSFGSYQGGM 60 GFEDDNAKQR GISFENDLIF SPLPDHNKPT SRGGLVDRIA ARAGFNAPRL NTESIILTDR 120 SSTGEVKSPY FTIPTGISPT ALLESPVFLS NPLTQASPTT GKFPLFAFEN NISSMVADNA 180 QSKEDFFDDV DGSSFAFKPP AESGLSFSLG TTDKMNQLMN PQALAKIEVS VRSENFFRNS 240 EPSLIHSHEG GFSHSLTEKD LGEITAGSDI KGLDTISGTA EHSPPLGDQH DDEGDQRISC 300 DSYAGGSAGS LTEDGYNWRK YGQKQVKGSE YPRSYFRCTH MNCPVKKKVE RSHEGIVTEI 360 IYKGAHNHPK PAPNHRSSIG SNQLDDTHDQ VGLENGGDRD SVWGTAQNGL LPVTHEWRND 420 SIEHKSLSSM NSELRNPSSS LQMQNGAVVE SGDVVDPSST CSNDEEEDDR VTHGRVSIAN 480 DGEGDESESK RRKIETYAAE IGGGATRAIR EPRVVVQTTS DVDILDDGYR WRKYGQKVVK 540 GNPNPRSYYK CTSAGCSVRK HVERASHDLK SVITTYEGKH NHDVPAARNS SHVTSAASAA 600 GGMGSQSQSL IPRHEPAQVT SMARYERQPH LSSFNLPMMQ PLGPPSHGFP TGMNQSNLAN 660 MSMAGLGPGQ NKFPGIPAYP YLMQQQQLQQ RHVNDLSFMM PKGEAKVEPN SDPNVYHPNG 720 SSVYNRTVNR LPLGP* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 4e-36 | 311 | 586 | 8 | 78 | Probable WRKY transcription factor 4 |
2lex_A | 4e-36 | 311 | 586 | 8 | 78 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021678272.1 | 0.0 | probable WRKY transcription factor 2 | ||||
Refseq | XP_021678273.1 | 0.0 | probable WRKY transcription factor 2 | ||||
TrEMBL | A0A2N9J9N8 | 0.0 | A0A2N9J9N8_FAGSY; Uncharacterized protein | ||||
STRING | XP_002529203.1 | 0.0 | (Ricinus communis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56270.1 | 1e-167 | WRKY DNA-binding protein 2 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.1100s0003.1.p |