PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.1001s0010.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 363aa    MW: 39701.1 Da    PI: 4.8987
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.1001s0010.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.96.7e-11223267549
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                          kr +r   NR +A+rsR RK+++i eLe+ v +L+ae + L  ++
  Kalax.1001s0010.1.p 223 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQAEVSVLSPRV 267
                          8999********************************988776655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-13219283IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.611221284IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.85E-11223277No hitNo description
PfamPF001706.1E-9223267IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.7E-13223274No hitNo description
CDDcd147031.66E-23224274No hitNo description
PROSITE patternPS000360226241IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    Send to blast
MAKLPPKIPN WPDFSYQKFI PPYAASLPPA APESNPSWVD EFLDFSSSKR GNHRRSISDS  60
ITYFEPSSEP VLELECGGGR RQRASTPQMH YGNAACDNDN TEEYLHQFVK FDDDDEGDQL  120
VSSMFNDEEV SLALGAPALA PLAVINASNP STPSDLGSIE DENNKQAYIP SGETTGNKLP  180
KCEANNEVDS SIKSESEGQQ TLSPATGVAT PTTSESERIV DPKRVKRILA NRQSAQRSRV  240
RKLQYISELE RSVTTLQAEV SVLSPRVAFL DHQRLVLNVD NSALKQRIAA LAQDKIFKDA  300
HQEALKKEIE RLRQVYERQQ SLKNNMGKAA AAAAATANAA SSTPAEAKAC IENEEQQLLA  360
AN*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021632854.11e-107basic leucine zipper 61-like isoform X2
SwissprotQ9M2K41e-90BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A2C9UST61e-106A0A2C9UST6_MANES; Uncharacterized protein
STRINGcassava4.1_024267m1e-104(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.18e-87bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]