PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0914s0010.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 168aa MW: 19623 Da PI: 5.5421 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.9 | 6.8e-20 | 15 | 66 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr..krfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+++AeIrd r +r++lg+f taeeAa+a+++a+ +++g+ Kalax.0914s0010.1.p 15 KYRGVRRRP-WGKFAAEIRDsH-----RggARVWLGTFNTAEEAARAYDRAAYEMRGA 66 8********.**********44.....234**************************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 23.736 | 15 | 73 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.4E-33 | 15 | 79 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.16E-23 | 15 | 74 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 4.8E-31 | 15 | 75 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 6.00E-19 | 15 | 74 | No hit | No description |
Pfam | PF00847 | 4.7E-15 | 15 | 65 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.2E-11 | 16 | 27 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.2E-11 | 39 | 55 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence Send to blast |
MRNDDQQQCQ PGGVKYRGVR RRPWGKFAAE IRDSHRGGAR VWLGTFNTAE EAARAYDRAA 60 YEMRGALAIL NFPEEYNIND GGRQQQPQEY NYGWQQHQQQ QQYYTDNYNN NNNNNSNMHP 120 SSSYSPMHGH GQGSSEEHHR NREVIEFEYL DDQLLDDLLD FDQYRGQ* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 9e-32 | 15 | 81 | 14 | 80 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010039174.1 | 6e-41 | PREDICTED: ethylene-responsive transcription factor ERF096 | ||||
TrEMBL | A0A2P5CNM2 | 2e-40 | A0A2P5CNM2_PARAD; AP2/ERF transcription factor | ||||
STRING | XP_010039174.1 | 2e-40 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43410.1 | 9e-24 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0914s0010.1.p |