PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0890s0010.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GeBP
Protein Properties Length: 446aa    MW: 49976.8 Da    PI: 4.3489
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0890s0010.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573113.31.5e-35134233198
               DUF573   1 klfqrlwseeDeivlLqGlidfkaktgkspsd..didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqki 88 
                          klfqrlw++eDei lLqG++d  +++g+s+ +  d+  fy+++k++++++++k+qlveK+rrLKkK+++  ++++sgke++f+++hdq +
  Kalax.0890s0010.1.p 134 KLFQRLWTDEDEIGLLQGFLDHSTQRGSSQNNphDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVLSRVSSGKEIQFKSPHDQAT 223
                          579************************9555446******************************************************** PP

               DUF573  89 felskkiWgs 98 
                          fe++ kiWg+
  Kalax.0890s0010.1.p 224 FEIACKIWGT 233
                          ********95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.4E-33136232IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    Send to blast
MSSDEDQQAP IAGHNEEDDE PDEIDDDEET DEDEEEEDDG EGELERNNNV MEEEEEDVDV  60
EEVDRTISLS SLNSDPTRSV TIAVAAPDIP IAEAAAEIAS ESTAKRLRIL EDEPIGELQR  120
VNPNPPPSDD QARKLFQRLW TDEDEIGLLQ GFLDHSTQRG SSQNNPHDTA LFYDQIKSKL  180
QLDFNKNQLV EKLRRLKKKY RNVLSRVSSG KEIQFKSPHD QATFEIACKI WGTAQNSQCS  240
KDRIQQPQQQ QMRVADVDDD MPPNFNPASA TNLNLNLVSN SNNFNSSGGY SNYHHSDRAG  300
VDEWKSQQQQ QKAKKRIRVK MEDIRSSTDH KAAVATNSSP SQIPIWGPPG TNLTAPSLVE  360
EIVKNRISPL MYDIKGNRGY GGLGDGIVRP VPLSFASPVN AIGTDATDDR WRKQQILELE  420
VYSKRLELVQ EQIKLTLEQL RSTGS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.24e-49DNA-binding storekeeper protein-related transcriptional regulator