PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0722s0027.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bZIP

Protein Properties

Length: 268aa MW: 30208.5 Da PI: 6.9742

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0722s0027.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.3	5.1e-11	159	206	5	52
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 kr +r NR +A+rsR +K+++i eLe+ v L++e +aL ++ l Kalax.0722s0027.1.p 159 KRVKRILANRQSAQRSRVKKLQYISELEQSVTLLQTEVSALSPRVAFL 206 899**********************************99998776655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.0E-12	155	219	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	1.0E-9	156	204	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.484	157	209	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	3.3E-13	159	211	No hit	No description
SuperFamily	SSF57959	1.61E-11	159	213	No hit	No description
CDD	cd14703	5.39E-21	160	210	No hit	No description
PROSITE pattern	PS00036	0	162	177	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence Send to blast
MAQLPPKVPP HMTQNWPSFP HHHHHHHTLF PPPLPPPNPQ SSWMDQFLEY SPNHRHRRSM 60 SDSITTFLGE ERKQHEKKDD RGHHDFDGLN EEQLMSMFSD NVVTLGDTSS VVSDQNSDNG 120 DCETGSSQKD VEMYMSSNGT GELGGASGGG SGDTITDPKR VKRILANRQS AQRSRVKKLQ 180 YISELEQSVT LLQTEVSALS PRVAFLDHQR LILSMDNSTL KQKIAALAQD SLFKDAHEDA 240 LKKEIERLRQ VYQHQQKSNK NASQRES*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator. {ECO:0000269\|PubMed:17719007}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022753652.1	1e-85	basic leucine zipper 34-like
Swissprot	Q9M2K4	2e-71	BZP61_ARATH; Basic leucine zipper 61
TrEMBL	A0A0D2R1K8	2e-83	A0A0D2R1K8_GOSRA; Uncharacterized protein
STRING	Gorai.002G064900.1	3e-84	(Gossypium raimondii)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	2e-70	bZIP family protein

Link Out ? help Back to Top
Phytozome	Kalax.0722s0027.1.p

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Gibalová A, et al. Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]