PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0705s0002.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bZIP | ||||||||
Protein Properties | Length: 268aa MW: 29145.6 Da PI: 6.0971 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 27.9 | 5.2e-09 | 87 | 136 | 3 | 51 |
XXCHHHCH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrk.qkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 e+k+ +r+ NReA r++R++Kka+ + Lee+v L a N++L k+l+ Kalax.0705s0002.1.p 87 EDKKSKRRpLGNREAVRKYREKKKARAASLEEEVVRLRAVNQQLVKRLQG 136 55555554389**********************************99974 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.7E-14 | 83 | 154 | No hit | No description |
SMART | SM00338 | 4.9E-10 | 86 | 153 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 3.6E-14 | 87 | 143 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.266 | 88 | 135 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.79E-7 | 90 | 136 | No hit | No description |
CDD | cd14686 | 5.26E-12 | 92 | 145 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0071294 | Biological Process | cellular response to zinc ion | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence Send to blast |
MDDGELDFSN QEVLSNSIMG EIGCDCSMDS LFDEIMKDMH ACTHTHTCNP PGPDNEHTHT 60 CLHVHTKIVP ASTEEKTTTT DDSAESEDKK SKRRPLGNRE AVRKYREKKK ARAASLEEEV 120 VRLRAVNQQL VKRLQGQAAL EAEVARLRCL LVDIRGRIDG EIGCFPYQKL ANPNVNSGYV 180 MNQCNVQCDD QIYCPYPGGV GKSSMVNRSD VHGFTGCGLE DNQCLSTPTI EPTDLPACDA 240 GNGATEVISS GASKRKRGGR ASNAGRS* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in the response to zinc ion deficiency. Binds to the consensus sequence 5'-[AG]TGTCGACA[CT]-3' also called zinc deficiency response element (ZDRE). The ZDRE sequence is conserved in the plant kingdom and present in the promoters of genes that constitute the primary response to zinc deficiency, comprising additional ZIP metal transporter genes (PubMed:20479230, PubMed:26306426). Required for zinc accumulation in roots. Mediates the expression of the zinc transporter ZIP12 during growth in zinc-deficient conditions. ZIP12 transporter is involved in zinc uptake in roots (PubMed:26306426). {ECO:0000269|PubMed:20479230, ECO:0000269|PubMed:26306426}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by zinc deficiency. {ECO:0000269|PubMed:20479230}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021900344.1 | 1e-123 | basic leucine zipper 23-like isoform X2 | ||||
Refseq | XP_021900345.1 | 1e-123 | basic leucine zipper 23-like isoform X2 | ||||
Swissprot | Q8GTS2 | 1e-101 | BZP23_ARATH; Basic leucine zipper 23 | ||||
TrEMBL | A0A2N9INI7 | 1e-120 | A0A2N9INI7_FAGSY; Uncharacterized protein | ||||
STRING | evm.model.supercontig_37.136 | 1e-120 | (Carica papaya) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16770.1 | 1e-85 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0705s0002.1.p |
Publications ? help Back to Top | |||
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