PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0516s0001.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | WRKY | ||||||||
Protein Properties | Length: 247aa MW: 26523.4 Da PI: 7.6184 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 74.7 | 1.2e-23 | 205 | 245 | 2 | 42 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-S CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversa 42 DgynWrKYGqK+vkg efprsYY+Ct+++C+vkk +er++ Kalax.0516s0001.1.p 205 TDGYNWRKYGQKHVKGCEFPRSYYKCTHPNCEVKKLLERNH 245 6**************************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.4E-20 | 197 | 245 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 19.118 | 199 | 247 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 4.58E-19 | 202 | 246 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.7E-17 | 204 | 247 | IPR003657 | WRKY domain |
Pfam | PF03106 | 9.5E-18 | 206 | 246 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence Send to blast |
MNLTNPHSAS DHLGRSGPHE PRFVPSHTTI PSPPAATEAA DTVVATVSSI PNVSRYKLMS 60 PAKLPISRSM PHTAPPGLSP SSQLDSPVQF CNIKVEPSPT TGTLHKPQPM LGGVGYAAAA 120 STSYANNSAC VGKISDNSEF GTQSQSNFAT GSSLLPSQAF PVTESQQYEL QSQHIEGEKA 180 IQYATASPPD QNEVRLSAVS DNSSTDGYNW RKYGQKHVKG CEFPRSYYKC THPNCEVKKL 240 LERNHDG |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028221436.1 | 2e-48 | probable WRKY transcription factor 20 isoform X2 | ||||
Swissprot | Q93WV0 | 1e-42 | WRK20_ARATH; Probable WRKY transcription factor 20 | ||||
TrEMBL | A0A2I4KKT0 | 2e-45 | A0A2I4KKT0_POPTR; WRKY family protein | ||||
TrEMBL | A0A2K2C9A1 | 7e-47 | A0A2K2C9A1_POPTR; Uncharacterized protein | ||||
TrEMBL | A0A2K2C9A4 | 1e-45 | A0A2K2C9A4_POPTR; Uncharacterized protein | ||||
TrEMBL | B9GJX1 | 1e-45 | B9GJX1_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0001s37260.1 | 2e-46 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G26640.1 | 5e-24 | WRKY family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0516s0001.1.p |