PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0419s0020.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bZIP

Protein Properties

Length: 435aa MW: 45754.4 Da PI: 10.1616

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0419s0020.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.5	4.4e-16	358	410	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L+aeN++L+ + eel k+ + Kalax.0419s0020.1.p 358 RRQRRMIKNRESAARSRARKQAYTLELEAEVAKLKAENQDLQRKQEELMKLQE 410 79**********************************************99876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.0E-14	354	418	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.542	356	407	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.7E-14	358	407	No hit	No description
CDD	cd14707	6.53E-26	358	407	No hit	No description
SuperFamily	SSF57959	5.06E-11	358	408	No hit	No description
Pfam	PF00170	3.3E-14	358	410	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	361	376	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009414	Biological Process	response to water deprivation
GO:0009651	Biological Process	response to salt stress
GO:0009738	Biological Process	abscisic acid-activated signaling pathway
GO:0010255	Biological Process	glucose mediated signaling pathway
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0000976	Molecular Function	transcription regulatory region sequence-specific DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence Send to blast
MGTDLNFSGF GSGGGGGGGG GGGRGSAPAG RQSSIYSLTL DELQNSVGGS LGKDFGSMNM 60 DELLKNIWTA EEMQTMTTSC SGAAQMSVGA SSGGGLQKQG SLTLPRTLSQ KTVDEVWKDV 120 HKEYVGGKDG SGTSGTAFQQ KQQTLKEITL EEFLVRAGVV REDVNITSLQ ALANNSNNGG 180 PFYSELLLKA NTNNGASGRE IGFPLAAQGL GLSNQVPGAG SQIHVQAPIL PLNVNGARSS 240 QQPTRSPQPQ LFPKQPGPPP GYTGQMDSGV QLASPRMRGG LVGMSVNNSV VQGSGMGMVG 300 LGTASMNLVN ESSPNQLSSD GVGKSNGDLT SVSPVPYMFS GGIRGRRVNG AIEKVVERRQ 360 RRMIKNRESA ARSRARKQAY TLELEAEVAK LKAENQDLQR KQEELMKLQE NQVMESLPPG 420 PKRRCLRRAQ SSPW*

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence Send to blast

MGTDLNFSGF GSGGGGGGGG GGGRGSAPAG RQSSIYSLTL DELQNSVGGS LGKDFGSMNM  60
DELLKNIWTA EEMQTMTTSC SGAAQMSVGA SSGGGLQKQG SLTLPRTLSQ KTVDEVWKDV  120
HKEYVGGKDG SGTSGTAFQQ KQQTLKEITL EEFLVRAGVV REDVNITSLQ ALANNSNNGG  180
PFYSELLLKA NTNNGASGRE IGFPLAAQGL GLSNQVPGAG SQIHVQAPIL PLNVNGARSS  240
QQPTRSPQPQ LFPKQPGPPP GYTGQMDSGV QLASPRMRGG LVGMSVNNSV VQGSGMGMVG  300
LGTASMNLVN ESSPNQLSSD GVGKSNGDLT SVSPVPYMFS GGIRGRRVNG AIEKVVERRQ  360
RRMIKNRESA ARSRARKQAY TLELEAEVAK LKAENQDLQR KQEELMKLQE NQVMESLPPG  420
PKRRCLRRAQ SSPW*

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00186	DAP	Transfer from AT1G45249	Download

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022996660.1	1e-143	ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X1
Swissprot	Q9M7Q4	1e-110	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A061FIW7	1e-131	A0A061FIW7_THECC; Abscisic acid responsive elements-binding factor 2 isoform 1
STRING	EOY14438	1e-132	(Theobroma cacao)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	2e-83	abscisic acid responsive elements-binding factor 2

Link Out ? help Back to Top
Phytozome	Kalax.0419s0020.1.p

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]