PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0390s0003.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GeBP
Protein Properties Length: 410aa    MW: 45202.7 Da    PI: 6.2309
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0390s0003.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF5731185.2e-37172267297
               DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifel 91 
                          lfqrl+se+Dei++L+G+++f ak+g +p dd+++f++fvk+si+++v++ qlv+Ki+rL+kK++++++++k+g +++fsk+h+q +++l
  Kalax.0390s0003.1.p 172 LFQRLFSEDDEIAVLKGMLEFSAKKGIDPIDDVNGFHDFVKDSIHVDVTSAQLVDKIKRLRKKYENNMRRSKTGVDKTFSKPHEQISYDL 261
                          79**************************************************************************************** PP

               DUF573  92 skkiWg 97 
                          skkiWg
  Kalax.0390s0003.1.p 262 SKKIWG 267
                          *****8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.5E-32173267IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    Send to blast
MAPKKPTPFE QPPRADSSSD DEEEEEQESD NSEEEDEQPQ PKVVPPAAEK KPVLSKKPEP  60
KPHSSSDEDG SVSGSDSETT LPAADPTIKP VPSKPAEDSP KVSSKSKLKK PDAPPPAVSV  120
AGKRPGESKG DVKNTKKSKK VADVEDRQVM EAKKPATDEE VKKVGEDSKK QLFQRLFSED  180
DEIAVLKGML EFSAKKGIDP IDDVNGFHDF VKDSIHVDVT SAQLVDKIKR LRKKYENNMR  240
RSKTGVDKTF SKPHEQISYD LSKKIWGFEN AKATSASNGG GGGFELKANG KGKRTPKPNM  300
TPDQKEKHAS SLQIPKDIWA KNEHEHARSS CASSLLLTEI MRSKDTVGTG LSEEFFKRGL  360
ELLGDDVKAR LEDRWESLLL AEGELYCQRL ELIRDQVKLM LDAYKTSGL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25210.16e-33DNA-binding storekeeper protein-related transcriptional regulator