PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0330s0007.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 461aa    MW: 50568.9 Da    PI: 6.7526
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0330s0007.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.71.6e-10174216446
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                           k+ rr+++NReAAr+sR+RKka++++Le+  + L++  ++L+
  Kalax.0330s0007.1.p 174 QKALRRLAQNREAARKSRLRKKAYVQQLENSRARLSQLEQELQ 216
                          5889**************************9999999887665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.8E-8170218No hitNo description
SMARTSM003381.6E-7171235IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.507173217IPR004827Basic-leucine zipper domain
CDDcd147081.91E-21175227No hitNo description
SuperFamilySSF579597.74E-7175219No hitNo description
PfamPF001709.6E-7175216IPR004827Basic-leucine zipper domain
PROSITE patternPS000360178193IPR004827Basic-leucine zipper domain
PfamPF141441.8E-28259332IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 461 aa     Download sequence    Send to blast
MHSFRATAQP GPNMYCQSPF LIRGDESSRN YSRFSDLGVL EHAAAYHPRD AVDLSPSSGV  60
SLKSGHVAVM PNLHFGTMNA NIGSLDLLEG EGQFMFQNGH SMTPENNAVV VGGGGGALVS  120
GQLEHWGESG MVDNSQQTDT STDLDTDDKN QYCGVQQGSL IVVDSMSKGK SGDQKALRRL  180
AQNREAARKS RLRKKAYVQQ LENSRARLSQ LEQELQRARQ QGMFVASGIS GDYSSSVGSG  240
ALAFDMEYSR WLDEHHRLIN DLRSAVNSQV GDGELRILVD SIMTHYEEKF RIKCLGAKSD  300
VFHVLSGMWK TPAERCFMWL GGFRSSEILK ILGSHLEPLT DQQLMGICNL QQSSQQAEDA  360
LSQGMEALQQ SLVETLSATS LGPSGSGNVA DYMGQMAIAM GKLATLENFL HQADLLRQQT  420
LQQLHRILTT RQAARALLVI SDYISRLRAL SSLWLARPRD *
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017971464.10.0PREDICTED: transcription factor HBP-1b(c38) isoform X2
SwissprotQ415581e-171HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A061ECH80.0A0A061ECH8_THECC; BZIP transcription factor family protein isoform 1
STRINGEOY021120.0(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-130bZIP family protein