PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0303s0046.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

G2-like

Protein Properties

Length: 311aa MW: 33788.5 Da PI: 6.9953

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0303s0046.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.2	1.4e-31	27	80	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++Fv+a+++LGG+ekAtPk +l++m+v gLt++hvkSHLQ+YR+ Kalax.0303s0046.1.p 27 PRLRWTPELHSCFVQAIDKLGGQEKATPKLLLQVMDVRGLTISHVKSHLQMYRS 80 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	10.337	23	83	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	1.2E-29	23	84	IPR009057	Homeodomain-like
SuperFamily	SSF46689	2.51E-15	26	83	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.0E-23	27	80	IPR006447	Myb domain, plants
Pfam	PF00249	3.2E-7	28	79	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence Send to blast
MVSCGRGGGA GGSAGGGVRQ YVRSTVPRLR WTPELHSCFV QAIDKLGGQE KATPKLLLQV 60 MDVRGLTISH VKSHLQMYRS MMSDLSRQVN LNSSDTSKQS FEDHDGDADE EQDDDHNKMT 120 LHHHPSKPTS ESDSHFIYNN SVDCINPPKR ARFEMSGSSS VYEEDARVVV HDHRRAGGII 180 YDTVIISAAG PFSSSSTMLL QNPYNRSINA PLGFPVKESN FLQVVNKVDR NGFNRRVICK 240 AGTEDDDHRT GLSLSLSPVH PSTNRSVASS TSEASETVVS SSPTYSKGFS NSFADRPSIN 300 LDLSIALCGT *

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	9e-20	28	80	3	55	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	9e-20	28	80	3	55	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	9e-20	28	80	3	55	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	9e-20	28	80	3	55	Protein PHOSPHATE STARVATION RESPONSE 1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14600.1	1e-28	G2-like family protein

Link Out ? help Back to Top
Phytozome	Kalax.0303s0046.1.p