PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0254s0035.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GeBP
Protein Properties Length: 409aa    MW: 45134.7 Da    PI: 6.6579
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0254s0035.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573119.61.6e-37171266297
               DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifel 91 
                          lfqrl+se+Dei++L+G+++f ak+g +p dd+++f++fvk+si+++v++ qlv+Ki+rLKkK++++++++k+g +++fsk+h+q +++l
  Kalax.0254s0035.1.p 171 LFQRLFSEDDEIAVLKGMLEFSAKKGIDPIDDVNGFHDFVKDSIHVDVTSAQLVDKIKRLKKKYENNMRRSKTGVDKTFSKPHEQISYDL 260
                          79**************************************************************************************** PP

               DUF573  92 skkiWg 97 
                          skkiWg
  Kalax.0254s0035.1.p 261 SKKIWG 266
                          *****8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045049.4E-33172266IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    Send to blast
MAPKKPTPFE QPPRADSSSD DEEEEQESDD SEEEDEQKQP KVVPPAAEKK PVLSKKPEPK  60
PHSSSDEDGS VSGSDSETTL PAADPSIKPV PSKPAEDSPK VSSKSKLKKP DAPPPAVSVA  120
GKRPGESKGD VKNTKKSKKV ADVEDRQVME AKKPATEEEV KKVGEDSKKQ LFQRLFSEDD  180
EIAVLKGMLE FSAKKGIDPI DDVNGFHDFV KDSIHVDVTS AQLVDKIKRL KKKYENNMRR  240
SKTGVDKTFS KPHEQISYDL SKKIWGFENA KATSASNGGG GGFELKANGK GKRTPKPNMT  300
PDQKEKHASS LQIPKDIWAK NEHEHARSSC ASSLRLTEIM RSKDTVGTGL SEEFFKRGLE  360
LLGDDVKARL EDRWESLLLA EAELYCQRLE LIRDQVKLML DAYKTSGL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25210.12e-33DNA-binding storekeeper protein-related transcriptional regulator