PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0240s0013.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | WRKY | ||||||||
Protein Properties | Length: 286aa MW: 31531.9 Da PI: 6.1625 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 76.2 | 3.8e-24 | 120 | 178 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqK++ ++++pr+Y++Ct + +C++ k+v++ ++dp + +it +g+H++e Kalax.0240s0013.1.p 120 ADGYAWRKYGQKPILNAKHPRNYFKCTNSpHCQALKRVQQMDDDPPMYKITCTGHHTCE 178 7**************************999***************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF118290 | 2.09E-23 | 111 | 178 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 2.7E-25 | 111 | 179 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 18.406 | 114 | 175 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.5E-30 | 119 | 179 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.7E-23 | 121 | 178 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 286 aa Download sequence Send to blast |
MNPCRPESCL SADGELHVSD ELRRGRQAAT ELLGLIRQQT YLSTPNAPSS LSPDPATGLV 60 MRIIDSFSNS LSMLGCQESA PARGPSESNK NSSSSSGGRK CVKPRRGDYT WTQVTSTLVA 120 DGYAWRKYGQ KPILNAKHPR NYFKCTNSPH CQALKRVQQM DDDPPMYKIT CTGHHTCENL 180 SNPSSLVNNM ASSIMVNFEM SKNDEKSNSA DRIATDLSPP QFRRVKEEES KNHQPGSSYS 240 THDNLPIVEN VETAAMTSPK DEQWSSLDDF DYLIGSLEFN EDASS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 6e-16 | 121 | 177 | 10 | 68 | OsWRKY45 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 2e-23 | WRKY DNA-binding protein 70 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0240s0013.1.p |