PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0226s0051.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bZIP

Protein Properties

Length: 390aa MW: 41106.4 Da PI: 10.0952

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0226s0051.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.2	5.6e-16	311	362	5	56
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+k+ e+ ++ Kalax.0226s0051.1.p 311 RRQRRMIKNRESAARSRARKQAYTTELEAEVAKLKEENQELQKKQAEIMEMH 362 79****************************************9999888875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.8E-14	307	371	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.381	309	360	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.3E-15	311	360	No hit	No description
CDD	cd14707	5.10E-26	311	358	No hit	No description
SuperFamily	SSF57959	1.44E-11	311	361	No hit	No description
Pfam	PF00170	7.9E-14	311	363	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	314	329	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009409	Biological Process	response to cold
GO:0009414	Biological Process	response to water deprivation
GO:0009651	Biological Process	response to salt stress
GO:0009737	Biological Process	response to abscisic acid
GO:0010152	Biological Process	pollen maturation
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence Send to blast
MGTNLNFNYF GGGGGGGGVE RQLGDLPLTR QTSIYALTFD ELQSAMGGNL GKDFGSMNMD 60 ELLKNIWTAE ESHTTAAVAG NDGGVGVGSS LQRQGSVTLP RTLSHKTVDE IWKDMTSKEV 120 NGGGGGGGSG GFTQRQPTLG EITLEEFLVR AGVVREDANT PQNLAFGFQQ AGLMSNSSNQ 180 MMMQSANLPM NVNGVTSSLQ QPLAASQAQP LFPKQPGLSY GHPLGLPGGA QLGSPRLRGG 240 LVGVSDPRLI RGGGLGVAGL GPGAGVTVAV GSPAQLASNG DTSLLSPVPY VFNGGVRGRR 300 ANGAVEKVVE RRQRRMIKNR ESAARSRARK QAYTTELEAE VAKLKEENQE LQKKQAEIME 360 MHKNQVLEMM SNQGVGKRQC LRRTQTGPW*

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence Send to blast

MGTNLNFNYF GGGGGGGGVE RQLGDLPLTR QTSIYALTFD ELQSAMGGNL GKDFGSMNMD  60
ELLKNIWTAE ESHTTAAVAG NDGGVGVGSS LQRQGSVTLP RTLSHKTVDE IWKDMTSKEV  120
NGGGGGGGSG GFTQRQPTLG EITLEEFLVR AGVVREDANT PQNLAFGFQQ AGLMSNSSNQ  180
MMMQSANLPM NVNGVTSSLQ QPLAASQAQP LFPKQPGLSY GHPLGLPGGA QLGSPRLRGG  240
LVGVSDPRLI RGGGLGVAGL GPGAGVTVAV GSPAQLASNG DTSLLSPVPY VFNGGVRGRR  300
ANGAVEKVVE RRQRRMIKNR ESAARSRARK QAYTTELEAE VAKLKEENQE LQKKQAEIME  360
MHKNQVLEMM SNQGVGKRQC LRRTQTGPW*

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027091459.1	1e-149	bZIP transcription factor 46-like
Refseq	XP_027091460.1	1e-149	bZIP transcription factor 46-like
Swissprot	Q9M7Q4	1e-110	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	M1STG3	1e-137	M1STG3_CAMSI; BZIP transcription factor bZIP8
STRING	cassava4.1_007256m	1e-135	(Manihot esculenta)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	1e-68	abscisic acid responsive elements-binding factor 2

Link Out ? help Back to Top
Phytozome	Kalax.0226s0051.1.p

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]