PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0198s0039.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | WRKY | ||||||||
Protein Properties | Length: 733aa MW: 79562.8 Da PI: 5.8926 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 101 | 6.8e-32 | 313 | 370 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsY+rCt+ +Cpvkkkvers+ ++ v+ei+Y+g Hnh+k Kalax.0198s0039.2.p 313 EDGYNWRKYGQKQVKGSEYPRSYFRCTHMNCPVKKKVERSH-EGIVTEIIYKGAHNHPK 370 8****************************************.9**************85 PP | |||||||
2 | WRKY | 103.7 | 9.8e-33 | 525 | 583 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k v++tYeg+Hnh+ Kalax.0198s0039.2.p 525 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASHDLKSVITTYEGKHNHD 583 59********************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 24.225 | 307 | 371 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 8.7E-28 | 310 | 371 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.88E-25 | 311 | 371 | IPR003657 | WRKY domain |
SMART | SM00774 | 5.3E-37 | 312 | 370 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.5E-25 | 313 | 369 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 6.5E-37 | 510 | 585 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.09E-28 | 517 | 585 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 38.618 | 520 | 585 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.0E-37 | 525 | 584 | IPR003657 | WRKY domain |
Pfam | PF03106 | 4.5E-25 | 526 | 583 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009555 | Biological Process | pollen development | ||||
GO:0009942 | Biological Process | longitudinal axis specification | ||||
GO:0030010 | Biological Process | establishment of cell polarity | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 733 aa Download sequence Send to blast |
MDEHAAAMMG DWVPPSPSPK AFFSSLLGGD EQISTGPMPQ IPDEARNGGC SSFGSYQGGM 60 GFEDDNAKQR GISFENDLIF SPLPDHNKPT SRGGLVDRIA ARAGFNAPRL NTESIILTDR 120 SSTGEVKSPY FTIPTGISPT ALLESPVFLS NPLTQASPTT GKFPLFAFEN NISSMVAENA 180 QSKEDFFDDV DGSSFAFKPP AESGLSFSLG TTDKMNQLMN PQALPKIEVS VRSENFFRNS 240 EPSLIHSHEG GFSHSLTEKD LGEITAGSDI KGLDTISGTA EHSPPLGDQH DDEGDQRISS 300 DSYAGGSAGS LAEDGYNWRK YGQKQVKGSE YPRSYFRCTH MNCPVKKKVE RSHEGIVTEI 360 IYKGAHNHPK PAPNHRSSIG CNQLDDTHDQ VGLENCGDRD SVWGTAQNGL LPVTHEWRND 420 SFEHKSLSSM NSELRNPSSS LQMQNGAVVE SGDVVDPSST CSNDEEEDDR VTHGSVSIAN 480 DGEGDESESK RRKIETYAAE IGGGATRAIR EPRVVVQTTS DVDILDDGYR WRKYGQKVVK 540 GNPNPRSYYK CTSAGCSVRK HVERASHDLK SVITTYEGKH NHDVPAARNS SHVSSAAGGM 600 GSQSQSLIPR HEPSQVTSMA RYERQPHLSS FNLPMMQSLG APPHGFPTGV IQSSLANMSM 660 AGLGPGQNKF PGIPAYPYLM QQQQLQQRHV NDLSFMMPKG EAKVEPNSDP NVYHPNGSSV 720 YNRIVNRLPL GP* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 4e-36 | 311 | 586 | 8 | 78 | Probable WRKY transcription factor 4 |
2lex_A | 4e-36 | 311 | 586 | 8 | 78 | Probable WRKY transcription factor 4 |
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Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00071 | PBM | Transfer from AT5G56270 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023887809.1 | 0.0 | probable WRKY transcription factor 2 | ||||
Refseq | XP_023887810.1 | 0.0 | probable WRKY transcription factor 2 | ||||
TrEMBL | A0A2N9J9N8 | 0.0 | A0A2N9J9N8_FAGSY; Uncharacterized protein | ||||
STRING | VIT_19s0015g01870.t01 | 0.0 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56270.1 | 1e-164 | WRKY DNA-binding protein 2 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0198s0039.2.p |