PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0132s0082.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GeBP
Protein Properties Length: 310aa    MW: 34117.9 Da    PI: 9.8159
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0132s0082.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57358.22.2e-18621213998
               DUF573  39 efvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                          + vk++++++++k+q veK+rrLKkK+++  ++++ gke++f+++hdq +fe+++kiWg+
  Kalax.0132s0082.1.p  62 DLVKSKLQLDFNKNQPVEKLRRLKKKYRNVLARVSLGKEVQFKSPHDQATFEMANKIWGT 121
                          789*******************************************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.7E-1662120IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MTKSKTLSTI KRSFYGKDCL FVYFPGPNLM GRPLPLPVVP DADDPIRLSL VVPCVVSCLR  60
IDLVKSKLQL DFNKNQPVEK LRRLKKKYRN VLARVSLGKE VQFKSPHDQA TFEMANKIWG  120
TPQSSHSSKD QIHQQHQQQM RGVDVDDDMP PNFNPASANL NLNVASNFNN FNSSGGYNNH  180
HHHSDLLAAD ERKSQPEQQK AKKRIRVKME DSRSLMDQKG SAVAALASNL SPAQNPIWQP  240
VTGLSTPSLV EETVKNKISP LMYDRYGGSG VGGSGGLVDG IVSPVPLSFA SQVNLFGTEV  300
LDDRLICGV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.23e-24DNA-binding storekeeper protein-related transcriptional regulator