PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0124s0052.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bZIP | ||||||||
Protein Properties | Length: 461aa MW: 50538.9 Da PI: 6.7526 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.7 | 1.6e-10 | 174 | 216 | 4 | 46 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 k+ rr+++NReAAr+sR+RKka++++Le+ + L++ ++L+ Kalax.0124s0052.1.p 174 QKALRRLAQNREAARKSRLRKKAYVQQLENSRARLSQLEQELQ 216 5889**************************9999999887665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.8E-8 | 170 | 218 | No hit | No description |
SMART | SM00338 | 1.6E-7 | 171 | 235 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.507 | 173 | 217 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.74E-7 | 175 | 219 | No hit | No description |
CDD | cd14708 | 1.70E-21 | 175 | 227 | No hit | No description |
Pfam | PF00170 | 9.6E-7 | 175 | 216 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 178 | 193 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.8E-28 | 259 | 332 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 461 aa Download sequence Send to blast |
MHSFRATAQP GPNMYCQSPF LIRGDESSRN YSRFSDLGVL EHAAAYHPRD AVDLSPSSGV 60 SLKSGHVAVM PNVHFGTMNA NIGSLDLLEG EGQFMFQNGH SMTPENNAVV VGGGGGALVS 120 GQLEHWGESG MVDNSQQTDT STDLDTDDKN QYCGVQQGSL IVVDSMSKGK SGDQKALRRL 180 AQNREAARKS RLRKKAYVQQ LENSRARLSQ LEQELQRARQ QGMFVASGIS GDYSSSVGSG 240 ALAFDMEYAR WLDEHHRLIN DLRSAVNSQV GDGELRILVD SIMTHYEEKF RIKCLGAKSD 300 VFHVLSGMWK TPAERCFMWL GGFRSSEILK ILGSHLEPLT DQQLMGICNL QQSSQQAEDA 360 LSQGMEALQQ SLVETLSATS LGPSGSGNVA DYMGQMAIAM GKLATLENFL HQADLLRQQT 420 LQQLHRILTT RQAARALLVI SDYISRLRAL SSLWLARPRD * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017971464.1 | 0.0 | PREDICTED: transcription factor HBP-1b(c38) isoform X2 | ||||
Swissprot | Q41558 | 1e-171 | HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment) | ||||
TrEMBL | A0A061ECH8 | 0.0 | A0A061ECH8_THECC; BZIP transcription factor family protein isoform 1 | ||||
STRING | EOY02112 | 0.0 | (Theobroma cacao) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68640.1 | 1e-129 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0124s0052.1.p |