PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0114s0030.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | WRKY | ||||||||
Protein Properties | Length: 594aa MW: 65044.7 Da PI: 5.3362 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 104 | 8.4e-33 | 172 | 228 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vkgsefprsYY+Ct+++C+v+k+ver++ d++++ei+Y+++Hnh+ Kalax.0114s0030.2.p 172 EDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCEVRKQVERTH-DGQITEIVYKSNHNHP 228 7***************************************9.***************8 PP | |||||||
2 | WRKY | 104.5 | 5.8e-33 | 362 | 420 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gC v+k+ver+ +d+k+v++tYeg+Hnhe Kalax.0114s0030.2.p 362 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTPGCLVRKHVERAPDDNKCVVTTYEGKHNHE 420 59********************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.2E-29 | 164 | 230 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 24.398 | 166 | 230 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 6.15E-26 | 168 | 230 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.4E-36 | 171 | 229 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.8E-26 | 172 | 228 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 5.3E-35 | 347 | 422 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 36.896 | 357 | 422 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.18E-28 | 357 | 422 | IPR003657 | WRKY domain |
SMART | SM00774 | 6.0E-38 | 362 | 421 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.2E-25 | 363 | 420 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 594 aa Download sequence Send to blast |
MLLCCVVEWQ PSPTTGSYYS PPFNQDLSFL TNSMVAPTAA GGYCDSLPSF HGSEHPAGEL 60 NNLHYFKDLE TQDLDGGFLN LPSQQLPLEF ELPVLSNEFI ASASIRNDYI DVDFLSPADL 120 SNAHTTLPLS QPNDHTTSQR NDPMYIDGAA DHVMEEEKRA SSPRMGGMRT TEDGYNWRKY 180 GQKQVKGSEF PRSYYKCTHP NCEVRKQVER THDGQITEIV YKSNHNHPQP MPNRRLTPDS 240 AFAQNEMDAG EGCGGGTSRG KNEGLDRALS EPILTELSPT GREKRFGAFD SSEAAELASP 300 PHNHAAEDDE AVEENMADAN EVHNDATDLR RAEDCMVEPS MSSRGVREQK IVVEIETEVD 360 ILDDGYRWRK YGQKVVKGNP NPRSYYKCTT PGCLVRKHVE RAPDDNKCVV TTYEGKHNHE 420 VPAAKNSSNA SSNAGHLSSA HPVGQPSHMP LAGSAAMTTP AQAQFQPPPF ESKPYMGNGF 480 SAHSLPGNFG NDVSFGASSM YPMQYGSFGL AASYPNIQRA GLSISRSPIL DSAAANPMTL 540 HYGFDNHRGG GVIQTAHPGD ENDPPAEGQS RTRRMMSQLM TPDQNQTITA SRL* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 7e-35 | 172 | 423 | 8 | 78 | Probable WRKY transcription factor 4 |
2lex_A | 7e-35 | 172 | 423 | 8 | 78 | Probable WRKY transcription factor 4 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G26640.1 | 3e-75 | WRKY family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0114s0030.2.p |