PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0104s0092.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | NAC | ||||||||
Protein Properties | Length: 301aa MW: 33890.1 Da PI: 6.2614 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 149.2 | 2e-46 | 12 | 138 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 pGfrFhPt++el+ +yLkk ++g++l+ +i+ v+iy ++Pw+Lp +k +e+ewyfF++rd+k+ tg r+nr+t++g+Wkatg+d+++ Kalax.0104s0092.1.p 12 PGFRFHPTEDELLEFYLKKIISGNSLPY-FAINFVNIYLHDPWHLPDLAKIGEREWYFFVPRDRKQGTGGRPNRTTANGFWKATGSDRRI 100 9**************************9.56***************8888899************************************* PP NAM 93 lsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +s+ ++++gl+ktLvfy+grap+g ktdWvm+eyrl Kalax.0104s0092.1.p 101 ISTsePKRVIGLRKTLVFYRGRAPRGCKTDWVMNEYRL 138 *98666778***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 53.859 | 10 | 161 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 8.89E-57 | 11 | 161 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.3E-24 | 12 | 138 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence Send to blast |
MSADPKSDMD LPGFRFHPTE DELLEFYLKK IISGNSLPYF AINFVNIYLH DPWHLPDLAK 60 IGEREWYFFV PRDRKQGTGG RPNRTTANGF WKATGSDRRI ISTSEPKRVI GLRKTLVFYR 120 GRAPRGCKTD WVMNEYRLPD PHNHRSASSS QEIVLCKVYR KATSLKELEQ RAAMDQDDEA 180 RGVTPPPHFS LLPRTPSTDS LSADFEQMLE SMKDGDEEGA VGIAAEGRSF GVSSSSEFMS 240 SSSSSSTSSS GLKFPVGMDV MADLQVPKLD ADWTQDQFWT QFNSPWLMNL TPSYINLLNL 300 * |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 5e-48 | 3 | 167 | 9 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 5e-48 | 3 | 167 | 9 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 5e-48 | 3 | 167 | 9 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 5e-48 | 3 | 167 | 9 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 6e-48 | 3 | 167 | 12 | 174 | NAC domain-containing protein 19 |
3swm_B | 6e-48 | 3 | 167 | 12 | 174 | NAC domain-containing protein 19 |
3swm_C | 6e-48 | 3 | 167 | 12 | 174 | NAC domain-containing protein 19 |
3swm_D | 6e-48 | 3 | 167 | 12 | 174 | NAC domain-containing protein 19 |
3swp_A | 6e-48 | 3 | 167 | 12 | 174 | NAC domain-containing protein 19 |
3swp_B | 6e-48 | 3 | 167 | 12 | 174 | NAC domain-containing protein 19 |
3swp_C | 6e-48 | 3 | 167 | 12 | 174 | NAC domain-containing protein 19 |
3swp_D | 6e-48 | 3 | 167 | 12 | 174 | NAC domain-containing protein 19 |
4dul_A | 5e-48 | 3 | 167 | 9 | 171 | NAC domain-containing protein 19 |
4dul_B | 5e-48 | 3 | 167 | 9 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018841539.1 | 1e-110 | PREDICTED: NAC transcription factor 29-like | ||||
Swissprot | Q10S65 | 7e-85 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A2I4GCA4 | 1e-109 | A0A2I4GCA4_JUGRE; NAC transcription factor 29-like | ||||
STRING | Gorai.002G001900.1 | 1e-109 | (Gossypium raimondii) | ||||
STRING | Gorai.008G038800.1 | 1e-109 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 6e-89 | NAC domain containing protein 36 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0104s0092.1.p |
Publications ? help Back to Top | |||
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