PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0085s0062.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Nin-like

Protein Properties

Length: 270aa MW: 30533.3 Da PI: 9.3398

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0085s0062.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	82.4	4.5e-26	137	186	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 k ++ ++ls+yF++pi+ AAkeL+++lT+LK++CR++GI+RWPhRk+ sl Kalax.0085s0062.1.p 137 KVLTRKMLSQYFYMPITHAAKELNIGLTLLKKRCRELGIRRWPHRKLMSL 186 77999******************************************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.666	118	207	IPR003035	RWP-RK domain
Pfam	PF02042	7.6E-22	139	186	IPR003035	RWP-RK domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0051302	Biological Process	regulation of cell division

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence Send to blast
MVDWDYGLPV QESLLGSLPA MEEGLQVTDH LSPPMFVTHP SSVFIMKLLS VTLKAYASLC 60 IDCQHVPAET KMLSGGYAAE NNELGAVVWN NQIQHQSLSL LQQEDIVVSD ENEMREVDGV 120 GKKRARKVKD EQFGSSKVLT RKMLSQYFYM PITHAAKELN IGLTLLKKRC RELGIRRWPH 180 RKLMSLQTLI SNVQELGKQE GDGGKERLKM AVEELERERK MMEELPDMQL EGKTKKLRQA 240 CFKANYKKRR MMAGNGGQRP QSSSSLSQH*

Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Swissprot	Q9M9U9	3e-53	RKD1_ARATH; Protein RKD1

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18790.1	1e-48	RWP-RK domain-containing protein

Link Out ? help Back to Top
Phytozome	Kalax.0085s0062.1.p