PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0083s0036.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 640aa    MW: 69268.6 Da    PI: 6.2009
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0083s0036.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.42e-30389447259
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                           Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  Kalax.0083s0036.1.p 389 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILVTTYEGNHNHP 447
                          7***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.6E-33373449IPR003657WRKY domain
SuperFamilySSF1182901.7E-27381449IPR003657WRKY domain
PROSITE profilePS5081129.7383449IPR003657WRKY domain
SMARTSM007741.7E-36388448IPR003657WRKY domain
PfamPF031062.5E-26390447IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 640 aa     Download sequence    Send to blast
MATKAGFSSS GLSIDSDPFS SSSSPPIQHH LFFHPPPPPP PHIHYMESTT TATSAHSKAS  60
WSNPSPTIQF PLNLNYTSPD EHQPQDDDHG DIKFIHDDLR LSSDNEDHRH NRVINEMDFF  120
AVADHNKKKL IMNEDGGSSK LAAPTDFDPQ NATTKDPLHG STQDFNNVYT GLHLLTANTS  180
STDQSVVDDG SSPASDDARA KNEIVMLQAE IERMNKENQR LKDMLSHVSN NYSAMQVHLM  240
TLGDSQKKDA RDQQQLQMIA QEHQKEDQQQ MLGGSPQLVV QKQLMDLGLA PASDIHDQQS  300
LSSSENHEDG RSNSSPTNLE AASKLQMEEA REQIRTGMGR EGEAAHGLPN KVPKFNPSKS  360
NVDQASSTEA TMRKARVSVR ARSEAPMITD GCQWRKYGQK MAKGNPCPRA YYRCTMAAGC  420
PVRKQVQRCA EDRTILVTTY EGNHNHPLPP AAMAMASTTS SAARMLLSGS MSSADGLMNP  480
NFLSRTLLPC SSNMATISAS APFPTVTLDL TLNPNATQPP PNTLTQIQSQ FQNPSQNLPL  540
LPQILTQALY SHSKFSGLHM SQNDDSSSLA PKQQGSLADS LTAASAAIAA DPNFTAVIAA  600
AISSFIGNSH PSNSVTNNST NCNTDSGANI VNSSSFPEN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-21375451176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023921697.10.0probable WRKY transcription factor 31
SwissprotQ9XEC31e-128WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A438IL690.0A0A438IL69_VITVI; WRKY transcription factor 6
STRINGVIT_12s0059g00880.t010.0(Vitis vinifera)
STRINGEOX932430.0(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G22070.11e-112WRKY DNA-binding protein 31