PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0081s0007.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | NAC | ||||||||
Protein Properties | Length: 350aa MW: 38900.7 Da PI: 9.1224 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 171.9 | 1.9e-53 | 23 | 150 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 lppGfrFhPtdeel+++yL +k+++ +++ ++i++vd++k ePwdLp k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdk Kalax.0081s0007.1.p 23 LPPGFRFHPTDEELITFYLLNKLADASFTG-RAIADVDLNKNEPWDLPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATSTGYWKTTGKDK 111 79*************************999.89***************99999************************************* PP NAM 91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 e++++ + el+g+kktLvfy+grap+gek++Wvmheyr Kalax.0081s0007.1.p 112 EIFNSvSAELIGMKKTLVFYRGRAPRGEKSNWVMHEYRC 150 ***9988899***************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.11E-62 | 16 | 172 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 59.963 | 23 | 172 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.4E-28 | 24 | 149 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 350 aa Download sequence Send to blast |
MERVSSGDHV EQNKKAAAAT ETLPPGFRFH PTDEELITFY LLNKLADASF TGRAIADVDL 60 NKNEPWDLPG KAKMGEKEWY FFSLRDRKYP TGVRTNRATS TGYWKTTGKD KEIFNSVSAE 120 LIGMKKTLVF YRGRAPRGEK SNWVMHEYRC HNSKATFRLA KDEWVVCRVF QKSAGIKKQY 180 STQQQSSSSR SIDPYNMDMS STTLMPPMLQ QDNTLHYPIG RASAATTNYM INSVDQLAEL 240 TRALRSNAAS ATAMNHLPII PPPHQQLNNY PNNSAAGSLN LNLGRRQAAA SSGSMIVAQL 300 ADVGMMMNTD SVNTAATSNY GDQHQGGGYI GLNNNMDQCM DLDSYWASY* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 8e-56 | 7 | 178 | 1 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 8e-56 | 7 | 178 | 1 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 8e-56 | 7 | 178 | 1 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 8e-56 | 7 | 178 | 1 | 171 | NO APICAL MERISTEM PROTEIN |
4dul_A | 8e-56 | 7 | 178 | 1 | 171 | NAC domain-containing protein 19 |
4dul_B | 8e-56 | 7 | 178 | 1 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022731495.1 | 1e-129 | NAC domain-containing protein 100 | ||||
TrEMBL | A0A0M4FKX7 | 1e-126 | A0A0M4FKX7_MANES; NAC transcription factors 26 | ||||
TrEMBL | A0A2C9W5R6 | 1e-126 | A0A2C9W5R6_MANES; Uncharacterized protein | ||||
STRING | evm.model.supercontig_244.7 | 1e-127 | (Carica papaya) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24430.2 | 1e-104 | NAC domain containing protein 38 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0081s0007.1.p |