PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0069s0004.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | TCP | ||||||||
Protein Properties | Length: 431aa MW: 48309.9 Da PI: 7.2668 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 131.2 | 9.9e-41 | 128 | 301 | 2 | 128 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......................... 65 +gkkdrhski+T++g+RdRR+Rls+++a++fFdLq+ LGfdk+s+tieWL++++k ai e +g+ Kalax.0069s0004.1.p 128 TGKKDRHSKICTAQGLRDRRMRLSLQVARKFFDLQETLGFDKASNTIEWLFNMSKNAIMEVMGSdysrmdgpqrsfvdkcgcinnptsgn 217 79************************************************************************9999999999988887 PP TCP 66 .......ssssaseceaesssssasnsssg...................kaaksaakskksqksaasalnlakesrakarararertre 128 + s ce++++ s++ ++++ ++++s+ k+ ks++ + k+ r karararert e Kalax.0069s0004.1.p 218 etksiaaP----SLCEKNEDTYSSKCKQIAtnqttykdeggcnklksvnRQCRSTSKKLKSHQISF-CPRHTKDARDKARARARERTLE 301 77533330....334444444443333333444555666678888888777777765555555555.677888999**********987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03634 | 2.6E-42 | 128 | 301 | IPR005333 | Transcription factor, TCP |
PROSITE profile | PS51369 | 33.575 | 130 | 188 | IPR017887 | Transcription factor TCP subgroup |
PROSITE profile | PS51370 | 9.175 | 285 | 302 | IPR017888 | CYC/TB1, R domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 431 aa Download sequence Send to blast |
MMFSSSNSNG DSDCFRQYNG SISCSSFQFG STSSPVVLEE DQFLVDHLLF MPQEQQKFLF 60 GHEAELPLLD HHDFVDGMIE AGNLIGDQVS NAIPSQNHKK KDGVGSSNYE NKKDSKPVKK 120 PPNKRIRTGK KDRHSKICTA QGLRDRRMRL SLQVARKFFD LQETLGFDKA SNTIEWLFNM 180 SKNAIMEVMG SDYSRMDGPQ RSFVDKCGCI NNPTSGNETK SIAAPSLCEK NEDTYSSKCK 240 QIATNQTTYK DEGGCNKLKS VNRQCRSTSK KLKSHQISFC PRHTKDARDK ARARARERTL 300 EIIRLRVIQD PDQRLFTTCL EEAAATNPSN ITTFSEQIGS CSPFEQVDEI SGAQSQSLED 360 LILHADWEIE GARFYSSYIF DTTEHHHAVR TTTTAINLGE QSPDSISYMT SASQMFTNQL 420 CISSNTSTNN * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 111 | 119 | KKDSKPVKK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68800.1 | 2e-25 | TCP domain protein 12 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0069s0004.1.p |