PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0060s0102.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | WRKY | ||||||||
Protein Properties | Length: 405aa MW: 43676.4 Da PI: 6.3892 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 107.3 | 7.9e-34 | 191 | 248 | 1 | 58 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 ldDgy+WrKYGqK vk+s+fprsYYrCts++C vkk+vers+ed ++v++tYeg+H+h Kalax.0060s0102.1.p 191 LDDGYRWRKYGQKAVKNSPFPRSYYRCTSPSCAVKKRVERSSEDSTIVVTTYEGQHTH 248 59******************************************************** PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.5E-34 | 176 | 250 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.09E-28 | 183 | 249 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 31.433 | 186 | 251 | IPR003657 | WRKY domain |
SMART | SM00774 | 8.2E-40 | 191 | 250 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.7E-26 | 192 | 248 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 405 aa Download sequence Send to blast |
MERAEDQSGK IDSLLMMNPS SFADQIPATS FTLSGLFDTP PFAASPAPLP ASNSYDIDKS 60 GGGSILGFSD LLGFQDYCYG ASLFDLIQTS PPLAPVAMAP SPASTIHETS EVVNGPMTPN 120 SSSISMSSNE AAAAANEEQS KDCQDIIGEN NGQEDQDRDK TKKQLKPKKK NQKKEKEPRF 180 AFMTKSEVDH LDDGYRWRKY GQKAVKNSPF PRSYYRCTSP SCAVKKRVER SSEDSTIVVT 240 TYEGQHTHLS PVMARGSITN SLLHHHLETT NPNNKNNASN SCFVLGGSSP APPSFAVPQQ 300 PLFHHSHHRS QSPSSLFNNN ATPMVPSALS SFIDNNPSTA PSSHTPSPSL GPNPFFQQRH 360 FCPSPAADDQ HAAAPATAGG SSSCLMRDDG LLQDMILRSD LKEE* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 7e-26 | 184 | 251 | 10 | 77 | Probable WRKY transcription factor 4 |
2lex_A | 7e-26 | 184 | 251 | 10 | 77 | Probable WRKY transcription factor 4 |
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Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002279385.1 | 9e-74 | PREDICTED: probable WRKY transcription factor 48 | ||||
TrEMBL | A0A438GHD0 | 2e-72 | A0A438GHD0_VITVI; WRKY transcription factor | ||||
TrEMBL | D7SYJ2 | 2e-72 | D7SYJ2_VITVI; WRKY transcription factor | ||||
STRING | VIT_05s0077g00730.t01 | 4e-73 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47260.1 | 4e-40 | WRKY DNA-binding protein 23 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0060s0102.1.p |