PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0057s0151.2.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 459aa    MW: 50770.6 Da    PI: 5.6589
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0057s0151.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.19.7e-062723051755
                          HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                           ++f+ L++l+P++      K +K++ L  ++ Y+k+L+
  Kalax.0057s0151.2.p 272 DERFSALQSLIPSN-----DKADKVTLLDATISYLKELE 305
                          689**********8.....7****************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142157.1E-9844IPR025610Transcription factor MYC/MYB N-terminal
PROSITE profilePS5088810.429255304IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.0E-4259310IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.97E-9271320IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.0E-9271317IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.66E-5271309No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 459 aa     Download sequence    Send to blast
MNFIRPSYLQ TVVCFPFSGG VVEIGITELV PEDMNLIERI KALFLDNFRP QSTVPDTSLP  60
SGLLNNDMEL AGVEPDHDYL EANLDPIVEC KELDSLSTYD SASNVAADQL ADSFMLTDGA  120
SHVQGWHFAD EDFSNCVHHS FNSSNCISQT FALSAKAKLS PKIENLCEHH IPCPMERTKL  180
ESDDLHYQGV ISTLLKNSDL LDLDPRIGCC KKGSSFVKWS FVGRAGSSWS SNSMSQVMLR  240
KVLFEVGRNT GCAPVGRTEA VDRYEHSLDV LDERFSALQS LIPSNDKADK VTLLDATISY  300
LKELEKRVEK LESSKESTYL LNTPMATKSQ VTVERTSDNY GRTSNKNKPS TNKRKASYID  360
QVEPQNIAKT SRDNSTDVIC VSMVDNNVMI EMRCCWRECL LLKVMDAMSS LGLDSHMVQS  420
STSANGILQL TIKSKFKGSG CASVGVIRQK LKRILAQS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41315.13e-68bHLH family protein