PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0054s0088.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 305aa MW: 33994.7 Da PI: 6.7956 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.3 | 3.7e-10 | 138 | 185 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ +L+ l+P + +k + Ka +L + + YI+sLq Kalax.0054s0088.1.p 138 SHSLAERVRREKISERMRTLQALVPGS----DKVNGKALVLDHIISYIQSLQ 185 8*************************8....45599***************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 1.60E-11 | 132 | 189 | No hit | No description |
SuperFamily | SSF47459 | 4.45E-16 | 132 | 200 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.237 | 134 | 184 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 5.9E-15 | 134 | 198 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.5E-7 | 138 | 185 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.1E-8 | 140 | 190 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 305 aa Download sequence Send to blast |
MAYFPNHVGF QVPSLVGQSN HSFPDPFYPF ESHYPAVLHG HPPQCHTPPY ASPPTDGLER 60 ETRPSGGRSA PTSAQSKGLG RTQKPEGDSK KQKDSAADRK QKAGERVHQQ ETSITSHENY 120 PATDYIHVRA RRGQATDSHS LAERVRREKI SERMRTLQAL VPGSDKVNGK ALVLDHIISY 180 IQSLQTQVEY LSMKLANLSP IHDDEMRQDQ TMKPASCGQR CGPTEPTVAW TASTMTETSC 240 YNHHLESSNL LQQVERLFSQ DGYADGILPW DDVVDQTQRL IHFNSSELGN ALRYMYQTAP 300 ADDI* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021286178.1 | 2e-47 | transcription factor bHLH137 | ||||
Refseq | XP_021286179.1 | 2e-47 | transcription factor bHLH137 | ||||
TrEMBL | A0A0B0N1M1 | 3e-43 | A0A0B0N1M1_GOSAR; Transcription factor protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50915.2 | 1e-44 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0054s0088.1.p |