PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0053s0069.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GeBP
Protein Properties Length: 393aa    MW: 44239.6 Da    PI: 4.511
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0053s0069.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573101.67e-32178269397
               DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifels 92 
                           qrl+see ei lL+G++df++ktgk+ +dd+d+fye+vkk++++ +sksql++K+++LK+K++k+v+k+k+g+e    k+ d+k +els
  Kalax.0053s0069.1.p 178 GQRLFSEESEIELLKGMVDFADKTGKDFKDDLDGFYEYVKKELDVAFSKSQLLTKVKNLKRKYTKNVEKVKNGEE---LKPLDKKFYELS 264
                          69*******************************************************************999999...79********** PP

               DUF573  93 kkiWg 97 
                          +kiWg
  Kalax.0053s0069.1.p 265 SKIWG 269
                          ****8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.7E-25179269IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    Send to blast
MAPKRPSPLE DPPSASSSDD EEVAADEEVE EEEAAAEEEE EEEVAEEEEE EEVEEEEEEE  60
EEEEEEVGDE ETLKSSALPV ASSQPIVKKP AVEDVQNVHK KASKPVEDVE MKKANLKSAK  120
VLYMKSIPKA GEKREVEEKE VVVVAVPAAV SKDGKKRKKI ETVASEEKQQ LEDSKKQGQR  180
LFSEESEIEL LKGMVDFADK TGKDFKDDLD GFYEYVKKEL DVAFSKSQLL TKVKNLKRKY  240
TKNVEKVKNG EELKPLDKKF YELSSKIWGG GGAVKSVING GIDVASKSNG KRKRVKKEHI  300
FNNEEEMCEA TRKEAEVDSL SLMELMKSSA GYVLNEELIK RGWNSISKDK RMKMNEQWDS  360
LLLDEVKLNL RRLELARLHG QLVLDAFGAS SH*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1154158KKRKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25210.13e-20DNA-binding storekeeper protein-related transcriptional regulator