PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0051s0106.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 236aa MW: 26029.7 Da PI: 6.3438 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 11.3 | 0.00063 | 105 | 146 | 8 | 54 |
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+RR+r+ ++ L++l+P + ++ a+ e++ +YIk L Kalax.0051s0106.1.p 105 LARQRRSRMSDKTRCLQKLIPLE-----RQMDTATLYEETYKYIKFL 146 569*******************8.....6799999999999999988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 12.043 | 97 | 146 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.04E-5 | 100 | 151 | No hit | No description |
SuperFamily | SSF47459 | 3.14E-9 | 102 | 165 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.3E-5 | 103 | 152 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.6E-7 | 104 | 153 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence Send to blast |
MNQKDALFPA NAAAAEDEGR ANFDAICYSG GVDLSRLLMP SFDNTNITSS SSSFPYTPLL 60 PPPAASLFSD TYNHPAAPLP RPHLIMTTPK QHLPLPATVV PSSALARQRR SRMSDKTRCL 120 QKLIPLERQM DTATLYEETY KYIKFLEAQI SVLLSMPVQA PCSPDLLQLV DVYGGLGRLN 180 RQQMLQVLVN SQVAQTLMYT NGWCVFSAEQ LSSSSLLTHN HQNDQDTAVV EQQFL* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007043370.2 | 6e-42 | PREDICTED: transcription factor bHLH117 | ||||
Refseq | XP_021298831.1 | 9e-42 | transcription factor bHLH117 | ||||
TrEMBL | A0A061E4F6 | 2e-40 | A0A061E4F6_THECC; DNA binding-like protein | ||||
STRING | EOX99201 | 4e-41 | (Theobroma cacao) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22100.1 | 4e-22 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0051s0106.1.p |