PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0043s0036.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | WRKY | ||||||||
Protein Properties | Length: 294aa MW: 32101.4 Da PI: 5.4486 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 67 | 2.9e-21 | 127 | 188 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-S....SSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversa....edpkvveitYegeHnh 58 dDg++WrKYGqK++ ++++pr+Y+rCts+ +C++ k+v++ + +d + +i+ +g H++ Kalax.0043s0036.1.p 127 DDGHAWRKYGQKPILNAKHPRNYFRCTSKpDCQALKRVQKMDdnddDDRPMYKIIHTGLHTC 188 8***************************99*********97621114677999999999998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 4.2E-22 | 116 | 190 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.57E-20 | 119 | 189 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 15.973 | 121 | 166 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.8E-27 | 126 | 190 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.6E-21 | 127 | 188 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence Send to blast |
MNQCGTGRCR SDDRELFRVG DELRRGRQAA TDLLGLMRQQ EYLSAAENAT SLDPALGLAM 60 KIADSFSNSL SILGCQDPAA VGGGSSESSN KRSSASSSGG ASSSGGRKRN KPRKADSWTE 120 VTSALIDDGH AWRKYGQKPI LNAKHPRNYF RCTSKPDCQA LKRVQKMDDN DDDDRPMYKI 180 IHTGLHTCLK PLNPSNVFGD MDSSIYLNFE ISERDNKKPS DSLEIVATLS PEFTVREVSK 240 DNQTGSSSTP LSENAETDTS PSENAQWCFD DLDYLIGSLE FNEHALSGAA LRF* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 1e-15 | 126 | 188 | 8 | 68 | OsWRKY45 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40750.1 | 1e-16 | WRKY DNA-binding protein 54 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0043s0036.1.p |