PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0036s0087.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | WRKY | ||||||||
Protein Properties | Length: 131aa MW: 14666 Da PI: 4.4509 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 33 | 1.2e-10 | 109 | 130 | 1 | 22 |
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 ldDg++WrKYG+K+vk+s++pr Kalax.0036s0087.2.p 109 LDDGFKWRKYGKKMVKNSPNPR 130 59*******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.5E-11 | 95 | 130 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 9.81E-9 | 102 | 130 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 13.597 | 104 | 130 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.8E-6 | 110 | 130 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 131 aa Download sequence Send to blast |
MDGNSSDYHN QNMHMSFGSL DCGEVSRAIF ANNEYLLDDW FIESGESEVT GQELGQQDPV 60 YQMNQVNGLE VNYNAQDEET DTRESGGRTG SAPVKSKVAF KTKSEIEILD DGFKWRKYGK 120 KMVKNSPNPR * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006474454.1 | 5e-21 | probable WRKY transcription factor 50 isoform X1 | ||||
Refseq | XP_024033930.1 | 3e-21 | probable WRKY transcription factor 50 isoform X1 | ||||
STRING | XP_006474454.1 | 2e-20 | (Citrus sinensis) | ||||
STRING | XP_006453040.1 | 1e-20 | (Citrus clementina) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26170.1 | 7e-18 | WRKY DNA-binding protein 50 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0036s0087.2.p |