PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0034s0080.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | WRKY | ||||||||
Protein Properties | Length: 217aa MW: 24748.5 Da PI: 6.7307 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 79.6 | 3.4e-25 | 50 | 109 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +dDgy WrKYGqK++ + ++prsYYrCt++ +C + k+v++++++p + itY+++H+++ Kalax.0034s0080.1.p 50 VDDGYGWRKYGQKPILNMKYPRSYYRCTHSdQCDALKQVQKTDDNPPTYMITYTNHHKCS 109 59****************************9***************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 8.4E-25 | 40 | 109 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.15E-23 | 43 | 110 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 20.289 | 45 | 106 | IPR003657 | WRKY domain |
SMART | SM00774 | 8.6E-31 | 50 | 110 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.3E-23 | 51 | 108 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence Send to blast |
MEFSQTSIVL STDKIATIQL LKLKTLNCTK YERDKQTHKL SWTRHTPVLV DDGYGWRKYG 60 QKPILNMKYP RSYYRCTHSD QCDALKQVQK TDDNPPTYMI TYTNHHKCSR SSSVEDLQNP 120 NYMDNGDSSL LINFASQRAT DHYCHNTPVK NLWPVKEEED TGDKHCLSPD DYLPSTSHFQ 180 VSETQHSDES GAAASSVTTA SHLFSYLDEL RAFLLG* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 3e-17 | 50 | 108 | 8 | 68 | OsWRKY45 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 6e-19 | WRKY DNA-binding protein 70 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0034s0080.1.p |