PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0031s0017.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 277aa    MW: 30226.4 Da    PI: 6.8048
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0031s0017.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.29.3e-11156203455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  Kalax.0031s0017.1.p 156 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 203
                          8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000838.99E-11150207No hitNo description
SuperFamilySSF474599.16E-18150220IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.828152202IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-17152218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.0E-8156203IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-10158208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MDPPTMMNQG PHSNMTEIWP FPISGGDDHA GSGEFELRRA HFAQFVGNPI SDASGDESMV  60
YEQRWSRQNG GKKRYEALSG DESAKLVSTS AASGLNDGHG KRNKLLRSTA DNGKGEAADV  120
EGTSGHATTE NNSKPAEPPK QDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP  180
GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS MKLEAINSRH PPGFDAFSSK DFNQQAFDSA  240
GVAAAVYTPQ PPRDYGRPSS PDWLHMQVGG GFDRSS*
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010272169.11e-102PREDICTED: transcription factor bHLH79-like isoform X2
SwissprotQ69WS36e-71BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A1U8B7E61e-101A0A1U8B7E6_NELNU; transcription factor bHLH79-like isoform X2
STRINGVIT_01s0026g01140.t011e-100(Vitis vinifera)
STRINGXP_010272168.11e-100(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.14e-83BIG PETAL P