PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0022s0173.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | C2H2 | ||||||||
Protein Properties | Length: 292aa MW: 30223.8 Da PI: 7.1262 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 10.8 | 0.0016 | 130 | 152 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC Cgk F + L H +H Kalax.0022s0173.1.p 130 YKCAVCGKEFGSYQALGGHKASH 152 9*********9999998888777 PP | |||||||
2 | zf-C2H2 | 13.1 | 0.00028 | 183 | 205 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F++ L H r+H Kalax.0022s0173.1.p 183 HECGICHKQFPTGQALGGHKRRH 205 78*******************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57667 | 1.3E-8 | 129 | 205 | No hit | No description |
PROSITE profile | PS50157 | 10.118 | 130 | 152 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 2.0E-12 | 130 | 154 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.062 | 130 | 152 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 132 | 152 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 8.5E-12 | 182 | 207 | IPR007087 | Zinc finger, C2H2 |
PROSITE profile | PS50157 | 8.85 | 183 | 205 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.22 | 183 | 205 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 185 | 205 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence Send to blast |
MATEALSQHP PGLSESEDLG CKNKQAGSLL DGGFAKRKRS KRPRCEGGGG GEEELVGALS 60 EADMDLARSL MMLANGVVEE ERVGEVKVGG GGEADGGCLG AKESVSMEDV SVPSLLTVAE 120 TGSAVKTESY KCAVCGKEFG SYQALGGHKA SHRKLFADKI ETATATAVLT AASGGATGGG 180 RVHECGICHK QFPTGQALGG HKRRHYEGTL GKQSHQSHNH KTAASSSGVT TATTSDGAGS 240 SLSHRGFDLN IPALPDLWPV SRFAAAEEEV ESPHPAKKPR VFSPNYVQIR I* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27730.1 | 7e-31 | salt tolerance zinc finger |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0022s0173.1.p |