PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0021s0073.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GeBP
Protein Properties Length: 428aa    MW: 47611.1 Da    PI: 5.8128
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0021s0073.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573115.53.1e-36193288297
               DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifel 91 
                          lfqrl+se+Dei++L+G++++ ak+g++p+dd+++f++fvk+s++++v+  q++ Ki+rLKkK++++ +++k+g +++fsk+h+q +++l
  Kalax.0021s0073.1.p 193 LFQRLFSEDDEIAVLKGMLEYSAKNGSDPMDDLNGFHDFVKGSMHVDVTGAQFIHKIKRLKKKYENNARRSKEGVDKTFSKPHEQMSYDL 282
                          79**************************************************************************************** PP

               DUF573  92 skkiWg 97 
                          skkiWg
  Kalax.0021s0073.1.p 283 SKKIWG 288
                          *****8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045046.0E-32194288IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MAPKKPTPFE HPPRVDSSSD EEEEEEEEEE DDSGGSEKEE ETPQSQPVIA KKATLPPVAE  60
KNPALTKKPE LKPEESSSDE DGSDSDSGSD SEVTPPATDS SVKPISSNPA EDSPKVLRKN  120
KLKKPDASPV PPSAASVTKL AGKRPPEGKG DGKNPKKSKK VAEVEDRQVV EESKKPATDE  180
EVKKTGEDSK KQLFQRLFSE DDEIAVLKGM LEYSAKNGSD PMDDLNGFHD FVKGSMHVDV  240
TGAQFIHKIK RLKKKYENNA RRSKEGVDKT FSKPHEQMSY DLSKKIWGFE NAKAASASNG  300
GFELKANGKG KRTPKPNMTP DQKEKHASTL QFPKDIRVRS EQEHARQNRA SSFCFTELMR  360
SKDAVGMGFS EELFKRGLEL LADEEKARLE ERWKNLLVAE AELYYQRLEL IRDQVKLTLD  420
AYKNSAH*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25210.14e-32DNA-binding storekeeper protein-related transcriptional regulator