PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0016s0053.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | FAR1 | ||||||||
Protein Properties | Length: 98aa MW: 11162.8 Da PI: 9.8936 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 49 | 1.9e-15 | 20 | 95 | 2 | 76 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek..dgkw 76 f+ eY+ ++GF+ r+ + ++s+++g ++ fvC+kegkr e+++ +++r+raetrt+Ck k+ +++e gk+ Kalax.0016s0053.2.p 20 FWTEYGATTGFTPRRFYCHTSRKDGLPSNAVFVCNKEGKRGENSDL-MTKKRERAETRTSCKVKFGIHREPsaFGKY 95 9*****************************************9998.99******************9987444555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 3.2E-11 | 20 | 95 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 98 aa Download sequence Send to blast |
MGMIPKLGMD FDSVEDAWVF WTEYGATTGF TPRRFYCHTS RKDGLPSNAV FVCNKEGKRG 60 ENSDLMTKKR ERAETRTSCK VKFGIHREPS AFGKYRI* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 1e-11 | FAR1 family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0016s0053.2.p |