PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0012s0255.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 342aa MW: 38376.6 Da PI: 7.3675 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 45.9 | 1e-14 | 109 | 160 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++ + ++ Lr+llP+a ++++ + a+i+ A++Y+k+L+ Kalax.0012s0255.2.p 109 QRMTHIAIERNRRRQMSDYLSVLRSLLPPA---YAERGDQASIVGGAIDYVKNLE 160 79****************************...*******************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 1.30E-11 | 107 | 164 | No hit | No description |
SuperFamily | SSF47459 | 3.27E-17 | 108 | 179 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.713 | 108 | 159 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 9.6E-14 | 109 | 173 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 9.0E-12 | 109 | 160 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.1E-10 | 114 | 165 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 342 aa Download sequence Send to blast |
MPFLQMLHAL DPSIIHSLLK KNPTETETQI LPVDCCITHD TPELHSPVMS EGKNPTQVSP 60 DGTLEERGEL NSVSECRQDS SSQLSCGKMR KPRKHAKVVV ENKKDVEKQR MTHIAIERNR 120 RRQMSDYLSV LRSLLPPAYA ERGDQASIVG GAIDYVKNLE QLLQSLQAQK RQRKVDEMRN 180 RCCSNSMPLS PETSDGISTS TSSSTASLDE DCDMNSPLEK KADINIRVVQ THVNLHIGCD 240 DMKQSELIKL LIALERLRLK ILHLNITSIH KSSFYSLSLN VEDECELRST EEISSSIEQL 300 LNSINIYNGR RSSVTSKKED DAKMYGMPHH HPHGAAKKLN T* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 109 | 120 | RMTHIAIERNRR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
STRING | XP_008244210.1 | 8e-64 | (Prunus mume) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46810.1 | 3e-49 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0012s0255.2.p |