PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0008s0012.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | WRKY | ||||||||
Protein Properties | Length: 587aa MW: 63405.6 Da PI: 7.57 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 98.3 | 5e-31 | 335 | 393 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+ Kalax.0008s0012.1.p 335 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDTTILITTYEGNHNHP 393 7*********************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 2.1E-33 | 319 | 395 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 9.15E-28 | 327 | 395 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 30.136 | 329 | 395 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.7E-37 | 334 | 394 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.7E-26 | 336 | 393 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 587 aa Download sequence Send to blast |
MDGGWGVTTV AEADRSVIPF FASKPSVISG MKIFPVSLSG RRERDEPEES GRRVVCEVDF 60 FSGEREIKKA AAAARGGEKS GVSVKEEVLH GEPSKSDLNV NTRLNLLTAN AGSDQSTVED 120 GSSLDDKRAR TSQVSQMQME LGRLNAENQR LKEMLSQVSH NYQALQMHLI AFMQQHQQQQ 180 QQQQQQPVPV LESAVNHEVG GRKSEEMVSA AAVPRQSLNL GPGSVTQEQP DELSNSSSGE 240 RTRSGSLHNN NNLEIVSKRP RSDQENSRDG KGLVDREESP DSETHEWSRS SKAAKLRDNE 300 NAVCGAKLVD QQATEATMRK ARVSVRARSE APLISDGCQW RKYGQKMAKG NPCPRAYYRC 360 TMAVGCPVRK QVQRCAEDTT ILITTYEGNH NHPLPPAAVA MASTTSAAAS MLLSGSMSST 420 DGLMNPNLLA RAILPPCSSN IATISASAPF PTITLDLTHS PNPLHPQRQQ QQQQQPFSMP 480 AANNTFPQIL GQALYNQSRF SGLQLSQDSN PTSKGLPLPI PTPPTSLAQV QHTSFADTVS 540 AATAAITNDP NFTALIAAAI SSFISANNKQ PNSTSSNPNT TTQQQQ* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 5e-23 | 321 | 397 | 1 | 76 | WRKY transcription factor 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007026134.2 | 0.0 | PREDICTED: probable WRKY transcription factor 31 | ||||
Swissprot | Q9XEC3 | 1e-139 | WRK42_ARATH; WRKY transcription factor 42 | ||||
TrEMBL | A0A061GGS5 | 1e-180 | A0A061GGS5_THECC; WRKY family transcription factor | ||||
STRING | EOY28756 | 1e-180 | (Theobroma cacao) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22070.1 | 1e-119 | WRKY DNA-binding protein 31 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0008s0012.1.p |