PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0005s0197.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GeBP
Protein Properties Length: 414aa    MW: 45687.4 Da    PI: 7.9307
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0005s0197.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573117.29e-37179274297
               DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifel 91 
                          lfqrl+se+Dei++L+G++++ ak+g +p+dd+++f++fvk+si+++v+  ql++Ki+rLKkK++++ +++k+g +++fsk+h+q +++l
  Kalax.0005s0197.1.p 179 LFQRLFSEDDEIAVLKGMLEYSAKKGIDPMDDLNDFHDFVKGSIHVDVTGAQLIDKIKRLKKKYENNARRSKTGVDKTFSKPHEQISYDL 268
                          79**************************************************************************************** PP

               DUF573  92 skkiWg 97 
                          skkiWg
  Kalax.0005s0197.1.p 269 SKKIWG 274
                          *****8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.5E-32180274IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    Send to blast
MAPKKPTPFE HPPRADASSD EEEEEEESGG SEEEEEPPLS QPKITKKSTL PPAAEKNSTL  60
SKKPELKPEE SSSDEDGSDS ASDSGSDSEV TPPAPDPSVK PISSKPAEDA LKVLTKRKLK  120
KPDAPPAVAS AVSVTKSAGK RPAEGKGDGK NPKKSKKEAK KPAADEEVKK VGEDSKKQLF  180
QRLFSEDDEI AVLKGMLEYS AKKGIDPMDD LNDFHDFVKG SIHVDVTGAQ LIDKIKRLKK  240
KYENNARRSK TGVDKTFSKP HEQISYDLSK KIWGFENANA TSASNGGFEL NANGKGKRTP  300
KPNMTPDQKE KHASTLQIPK DIRVRNKQEH APLDYSSSLF LAELMKSKDA VRMGLSEELL  360
KRGLELLDDE MKARLEERWK NLLVAESELH YQRLGLIRDQ VKLSLDAYKN SRH*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25210.12e-30DNA-binding storekeeper protein-related transcriptional regulator