PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0001s0031.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bZIP | ||||||||
Protein Properties | Length: 188aa MW: 21383.9 Da PI: 6.147 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 50 | 6.5e-16 | 79 | 133 | 5 | 62 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 +r+rr+++NRe+ArrsR RK+ ++eL v L +eN++L+ e+l+++++++++ Kalax.0001s0031.1.p 79 RRQRRMISNRESARRSRMRKQRHLDELWSQVMRLRNENHSLI---ERLNNMCDSHDKL 133 79*************************************999...7777777777665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.6E-16 | 75 | 139 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.243 | 77 | 140 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.4E-13 | 79 | 137 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.39E-12 | 79 | 129 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 8.3E-12 | 79 | 152 | No hit | No description |
CDD | cd14702 | 1.12E-19 | 80 | 124 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 82 | 97 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence Send to blast |
MSGVNYFVPD DSTMFPGSFS MMQCNMPSLH FGGFLGSLPS AQILPPLQEF ALQPQYSLSN 60 NSTSDEADDQ QQHSVIDERR QRRMISNRES ARRSRMRKQR HLDELWSQVM RLRNENHSLI 120 ERLNNMCDSH DKLVQENAKL KEETADFRQL LSTLQIGSPY NALQDLDEVP CNTASTHSIN 180 SSIGMPH* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 91 | 98 | RRSRMRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027095835.1 | 1e-73 | basic leucine zipper 43-like | ||||
Swissprot | Q9FMC2 | 4e-37 | BZP43_ARATH; Basic leucine zipper 43 | ||||
TrEMBL | A0A068TW22 | 2e-72 | A0A068TW22_COFCA; Uncharacterized protein | ||||
STRING | VIT_01s0010g00930.t01 | 3e-68 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 1e-48 | basic leucine-zipper 42 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0001s0031.1.p |
Publications ? help Back to Top | |||
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