PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0863s0030.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Dof

Protein Properties

Length: 202aa MW: 21876.2 Da PI: 8.7056

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0863s0030.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.3	3.5e-38	12	71	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++lkcprCds+ntkfCyynny+lsqPr++Ck+C+ryWtkGG+lrn+PvGg++rk k+s Kaladp0863s0030.1.p 12 HEILKCPRCDSSNTKFCYYNNYNLSQPRHYCKNCKRYWTKGGTLRNIPVGGASRKITKRS 71 6789***************************************************87665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	7.0E-26	8	69	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	6.5E-33	14	68	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.239	15	69	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	17	53	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence Send to blast
MQDPYFSQFP EHEILKCPRC DSSNTKFCYY NNYNLSQPRH YCKNCKRYWT KGGTLRNIPV 60 GGASRKITKR SSSATTTAFL SSSSPSNSKR ATRTAATDQP VPVTSSAPAG LSSQQQQFVG 120 SSAAHLMDST YPRMGVSGFE QMGVAGDHQT GVSVRLADPK VESDEMRFGG LESGDMNSWS 180 GSINEWPDLA IYTSPGGSGF Q*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	DQ857254	7e-37	DQ857254.1 Glycine max Dof4 mRNA, complete cds.

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	9e-36	DOF zinc finger protein 1

Link Out ? help Back to Top
Phytozome	Kaladp0863s0030.1.p