PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0515s0213.2.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 131aa    MW: 14735.1 Da    PI: 4.5556
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0515s0213.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY331.2e-10109130122
                          ---SS-EEEEEEE--TT-SS-E CS
                 WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                          ldDg++WrKYG+K+vk+s++pr
  Kaladp0515s0213.2.p 109 LDDGFKWRKYGKKMVKNSPNPR 130
                          59*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-1195130IPR003657WRKY domain
SuperFamilySSF1182909.81E-9102130IPR003657WRKY domain
PROSITE profilePS5081113.597104130IPR003657WRKY domain
PfamPF031063.8E-6110130IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009867Biological Processjasmonic acid mediated signaling pathway
GO:0050832Biological Processdefense response to fungus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    Send to blast
MDGNSSDYHN QNMHMSFGSL DCGEVSRAIF ANNEYLLDDW FIESGESEVT GQELGQQDPV  60
YQMNQVNGLE VNYNAQDEET DTRESGGRTG RAPVKSKVAF KTKSEIEILD DGFKWRKYGK  120
KMVKNSPNPR *
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00531DAPTransfer from AT5G26170Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006474454.13e-21probable WRKY transcription factor 50 isoform X1
RefseqXP_024033930.12e-21probable WRKY transcription factor 50 isoform X1
STRINGXP_006474454.11e-20(Citrus sinensis)
STRINGXP_006453040.17e-21(Citrus clementina)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.18e-18WRKY DNA-binding protein 50