PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0515s0049.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | SAP | ||||||||
Protein Properties | Length: 460aa MW: 50778.4 Da PI: 7.2357 | ||||||||
Description | SAP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SAP | 677.4 | 1.9e-206 | 1 | 459 | 1 | 455 |
SAP 1 mssssssssseseegseggeggdassgesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsrsd 90 msss+ssss++ + + gg ++ ++ psssr+r +n vwpePf+ealatq+ai a+ ++Grlaaa+alan fqvcstwravsrs+ Kaladp0515s0049.1.p 1 MSSSTSSSSEDTDR---DNGGG--GERDVAVPSSSRPRFSNAVWPEPFVEALATQLAIHACITFGRLAAAPALANFFQVCSTWRAVSRSE 85 55555554443332...22222..2357889*********************************************************** PP SAP 91 llwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvde.....dndadal.sCrclalsdkylaaGfadGavrl 174 llw++ltr+iW++ +l r tWr+e+i+rhrta nfrtr+y+++ l+fdp d++ + d+da +Cr+lalsd +laaGf+dGavrl Kaladp0515s0049.1.p 86 LLWHNLTRQIWNVVQLRRPTWRDEFIFRHRTALNFRTRQYAHTILHFDPFDNAAasssaEVDPDARpTCRRLALSDVHLAAGFSDGAVRL 175 ***********************************************997764411111345555349********************** PP SAP 175 fdletrlhvstflpqh..rdrlGrfsravsGivisd..srlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGl 260 f+l+trlhv+t++p r rlGrfs+avsGivis+ srlvfatldGdihv+++ g ++ rra++Gd+v dGalvdf+G++rWwvG+ Kaladp0515s0049.1.p 176 FHLQTRLHVTTLRPLVrpRLRLGRFSSAVSGIVISHegSRLVFATLDGDIHVTTVMD-GGTPLRRAHAGDIVRDGALVDFTGCDRWWVGI 264 *************976125689************96448**************9987.569***************************** PP SAP 261 yaGvpGrafhiWdaeteelvfvGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssl 350 +aGvp rafhiW++e+eel fvGG+ltdPea+ GWhml+++telvGr+rv++retavaCtslrl++fdl nqg++l+e+e rrG++v++l Kaladp0515s0049.1.p 265 FAGVPERAFHIWNSESEELLFVGGTLTDPEALIGWHMLNDVTELVGRIRVSSRETAVACTSLRLIIFDLNNQGLILGESEPRRGIVVGAL 354 ****************************************************************************************** PP SAP 351 dasneayvvvdsrGvatvrrvenleevcrfrvrg.aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhva 439 d++ e+y++vd+rG+atvrrv++++evcrf+ rg +rg+lgC+n+gya ++a+g +rvWe+e+ + yly++ er+g +nal+addrhva Kaladp0515s0049.1.p 355 DVAGEVYMTVDTRGTATVRRVDDMTEVCRFNARGvPRRGLLGCINTGYAFLCAAGAIRVWEVERGG-YLYNFWERIGATNALIADDRHVA 443 **********************************999**************************966.*********************** PP SAP 440 vsssdgtihlldfgaq 455 +s +++tihl+dfgaq Kaladp0515s0049.1.p 444 ASCNHSTIHLWDFGAQ 459 **************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF81383 | 1.16E-7 | 65 | 116 | IPR001810 | F-box domain |
Gene3D | G3DSA:1.20.1280.50 | 8.2E-6 | 66 | 134 | No hit | No description |
Gene3D | G3DSA:2.130.10.10 | 1.1E-11 | 160 | 239 | IPR015943 | WD40/YVTN repeat-like-containing domain |
SuperFamily | SSF50978 | 2.56E-12 | 162 | 456 | IPR017986 | WD40-repeat-containing domain |
Gene3D | G3DSA:2.130.10.10 | 1.1E-11 | 302 | 456 | IPR015943 | WD40/YVTN repeat-like-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009554 | Biological Process | megasporogenesis | ||||
GO:0009908 | Biological Process | flower development | ||||
GO:0030163 | Biological Process | protein catabolic process | ||||
GO:0046622 | Biological Process | positive regulation of organ growth | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 460 aa Download sequence Send to blast |
MSSSTSSSSE DTDRDNGGGG ERDVAVPSSS RPRFSNAVWP EPFVEALATQ LAIHACITFG 60 RLAAAPALAN FFQVCSTWRA VSRSELLWHN LTRQIWNVVQ LRRPTWRDEF IFRHRTALNF 120 RTRQYAHTIL HFDPFDNAAA SSSAEVDPDA RPTCRRLALS DVHLAAGFSD GAVRLFHLQT 180 RLHVTTLRPL VRPRLRLGRF SSAVSGIVIS HEGSRLVFAT LDGDIHVTTV MDGGTPLRRA 240 HAGDIVRDGA LVDFTGCDRW WVGIFAGVPE RAFHIWNSES EELLFVGGTL TDPEALIGWH 300 MLNDVTELVG RIRVSSRETA VACTSLRLII FDLNNQGLIL GESEPRRGIV VGALDVAGEV 360 YMTVDTRGTA TVRRVDDMTE VCRFNARGVP RRGLLGCINT GYAFLCAAGA IRVWEVERGG 420 YLYNFWERIG ATNALIADDR HVAASCNHST IHLWDFGAQ* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022889432.1 | 0.0 | transcriptional regulator STERILE APETALA | ||||
Swissprot | Q9FKH1 | 1e-167 | SAP_ARATH; Transcriptional regulator STERILE APETALA | ||||
TrEMBL | A0A498H913 | 0.0 | A0A498H913_MALDO; Uncharacterized protein | ||||
STRING | XP_009343485.1 | 0.0 | (Pyrus x bretschneideri) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35770.1 | 1e-162 | SAP family protein |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0515s0049.1.p |
Publications ? help Back to Top | |||
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