PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0099s0093.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | EIL | ||||||||
Protein Properties | Length: 553aa MW: 61650.5 Da PI: 9.22 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 372.9 | 5.5e-114 | 51 | 388 | 2 | 303 |
XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksnks.neqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasds 90 el++r w+d ++lkr+ker++ +a++++ksn+s + +arrk m+raQD iLkYMlk +e+cna+GfvYgiip+kgkpv+gasd+ Kaladp0099s0093.1.p 51 ELQRRIWRDTIKLKRVKERQRLAA---LTAAEEQKSNQStTYHARRKRMARAQDRILKYMLKLVEICNARGFVYGIIPDKGKPVSGASDN 137 9*****************999643...4445666666551679*********************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HH CS EIN3 91 LraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelw 180 Lr+WWke v+f+ ++a+ ky+a++l++++++ + + ++ l++lqD+tlgSLLs+l+qhcdppqr++plekg++pPWWPtG+e+w Kaladp0099s0093.1.p 138 LRGWWKETVKFNESSTVALDKYEADCLAMAKQNAN--LNGNSYGVLQDLQDATLGSLLSSLIQHCDPPQRKYPLEKGIPPPWWPTGEEDW 225 ****************************9987777..5899999********************************************** PP HHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX... CS EIN3 181 wgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss... 265 w +lgl+++q+ ppy+kphdlkk+wkv++Ltavikhmsp+i++i++l +qsk+lqdkm+ake++++++vln++e+++ ++ s+ Kaladp0099s0093.1.p 226 WVKLGLPASQS-PPYRKPHDLKKMWKVGLLTAVIKHMSPDITKIKRLILQSKCLQDKMTAKETAIWVAVLNHQESLISLNVTSdlSEvsa 314 **********9.9*************************************************************9986444444533533 PP XXXXXXXXXXXXXXXXXXXX.XXXXXX.XXXXXXXXXX...................................X CS EIN3 266 slrkqspkvtlsceqkedve.gkkeskikhvqavktta...................................g 303 + ++++++ + ++++ v+ +++s ++ +++ta Kaladp0099s0093.1.p 315 NGQSGNKQAAIVNNHDFSVTdIEDASGLSKKGRENQTAdsvmdsqlpgdggctrirvgkqvknntggrrqpleR 388 22334444444444443333566666666665555555666777777777777777766664444444444442 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 1.3E-113 | 51 | 297 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 8.4E-67 | 176 | 302 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 2.35E-58 | 180 | 300 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 553 aa Download sequence Send to blast |
MGTAIVVAET EEMIHDICSD IEADEVRLDN LAGSDDLGEK DVSDEEIDSK ELQRRIWRDT 60 IKLKRVKERQ RLAALTAAEE QKSNQSTTYH ARRKRMARAQ DRILKYMLKL VEICNARGFV 120 YGIIPDKGKP VSGASDNLRG WWKETVKFNE SSTVALDKYE ADCLAMAKQN ANLNGNSYGV 180 LQDLQDATLG SLLSSLIQHC DPPQRKYPLE KGIPPPWWPT GEEDWWVKLG LPASQSPPYR 240 KPHDLKKMWK VGLLTAVIKH MSPDITKIKR LILQSKCLQD KMTAKETAIW VAVLNHQESL 300 ISLNVTSDLS EVSANGQSGN KQAAIVNNHD FSVTDIEDAS GLSKKGRENQ TADSVMDSQL 360 PGDGGCTRIR VGKQVKNNTG GRRQPLERNP VAKERAQQSS DNFNEEDIRS TQLNQLMDSV 420 GDGPFIKDGD RNSMQHKKSG AETSRKRQLV LHDPVARGPG LQSKNSRKRR RVLHEPVARG 480 PGLQSKKNRL DEDLSSVSVD KNHAEASSFE IQAHDTSHPN KQVVKLKPQE NDLGTQSYHA 540 LPSTKLSPTK NM* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wij_A | 2e-72 | 180 | 301 | 11 | 132 | ETHYLENE-INSENSITIVE3-like 3 protein |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 466 | 470 | RKRRR |
2 | 467 | 471 | KRRRV |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011037881.1 | 1e-156 | PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Swissprot | O23116 | 1e-141 | EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
STRING | POPTR_0001s05360.1 | 1e-155 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 1e-143 | ETHYLENE-INSENSITIVE3-like 3 |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0099s0093.1.p |
Publications ? help Back to Top | |||
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